PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022950637.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 222aa MW: 25382.3 Da PI: 9.7577

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022950637.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	82.6	2.6e-26	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+ rqvtfskRr+g++KKA+ELS+LCdae a+iifss+gk ye++s XP_022950637.1 10 RIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAS 59 8***********************************************86 PP
2	K-box	70	7.4e-24	84	167	15	98
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + ++e++ L++++ nLq+++R+l+Ge+L Ls+k+L++Le+qLe sl++iR kK+++l ++i+el +k ++++n +L +k+ XP_022950637.1 84 SDVKKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDLNSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKV 167 56799***************************************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MGRGKIVIRR IDNSASRQVT FSKRRKGLIK KAKELSILCD AELALIIFSS SGKQYEFAST 60 SIESVIEKYN RRKEEDELLL NPISDVKKEV SALRQQLLNL QENNRKLMGE QLYGLSIKDL 120 NSLESQLEFS LQSIRIKKEQ ILNDEIKELN RKGILMHQQN VELANKVNLF CQENIELHRK 180 VYGHDSRLEM SVATGNPLIP YAIGGDAGLR VPIHLQLSPR EQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	4e-65	MIKC_MADS family protein