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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022950636.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 225aa MW: 25809.8 Da PI: 9.7577 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82.5 | 2.6e-26 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+ rqvtfskRr+g++KKA+ELS+LCdae a+iifss+gk ye++s XP_022950636.1 10 RIDNSASRQVTFSKRRKGLIKKAKELSILCDAELALIIFSSSGKQYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 74.2 | 3.7e-25 | 85 | 170 | 13 | 98 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + + +q+e++ L++++ nLq+++R+l+Ge+L Ls+k+L++Le+qLe sl++iR kK+++l ++i+el +k ++++n +L +k+ XP_022950636.1 85 DVKLWQKEVSALRQQLLNLQENNRKLMGEQLYGLSIKDLNSLESQLEFSLQSIRIKKEQILNDEIKELNRKGILMHQQNVELANKV 170 5678******************************************************************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MGRGKIVIRR IDNSASRQVT FSKRRKGLIK KAKELSILCD AELALIIFSS SGKQYEFAST 60 SIESVIEKYN RRKEEDELLL NPISDVKLWQ KEVSALRQQL LNLQENNRKL MGEQLYGLSI 120 KDLNSLESQL EFSLQSIRIK KEQILNDEIK ELNRKGILMH QQNVELANKV NLFCQENIEL 180 HRKVYGHDSR LEMSVATGNP LIPYAIGGDA GLRVPIHLQL SPREQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37940.1 | 5e-70 | MIKC_MADS family protein |