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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022924973.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 215aa MW: 24185.6 Da PI: 9.4227 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 79.8 | 1.8e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n rqvtfskRr g++KKA+EL +LCda++a+i+fs +gkl++yss XP_022924973.1 9 KKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSS 59 689**********************************************96 PP | |||||||
2 | K-box | 50.2 | 1.1e-17 | 85 | 166 | 15 | 96 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 + + +akL +e +e++h+ GedL++L ++eL+qLe+ Le +l+++ ++K++ +l++i ++ke l +en++Lr+ XP_022924973.1 85 QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLGIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRN 166 5567889*************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MTRQKIQIKK IDNIAARQVT FSKRRRGLFK KAHELATLCD ADIALIVFSA SGKLFDYSSS 60 SMQELLRRHN MIPEVNSFGQ QPPSQVEKDA YAKLSEEFAA KTKELKHMRG EDLQDLGIEE 120 LKQLEKLLEI GLNRVIETKD DKFLKEIGAG KEKEALLMKE NQRLRNGMVT LNHREQEQAV 180 IGGSSLGSKS NTTNSSSSPN PNSHDFDDIS LKLGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 5e-50 | MIKC_MADS family protein |