PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022922668.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 244aa    MW: 28114.4 Da    PI: 9.9682
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022922668.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.43.9e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++ rqvtfskRr g+lKKA ELS+LCdaev +iifsstgkly+yss
  XP_022922668.1 10 RIDNSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIIFSSTGKLYDYSS 59
                    8***********************************************96 PP

2K-box821.4e-2781171999
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     +  ++ + +++e+a Lk++++ +q+ +R+l+Ge+L+ Ls+k+Lq+Le+qLe slk +R kK+++l e+i +l++k +++++en +L kkl+
  XP_022922668.1  81 NPVSELQFWKREAAGLKQQLHYMQECHRQLMGEELSGLSVKDLQNLESQLEMSLKGVRVKKEKILSEEITQLRQKGNQMHQENLELYKKLD 171
                     556789*********************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KARELSILCD AEVGLIIFSS TGKLYDYSSS  60
SIRSITDRYN KMKEEQNQLM NPVSELQFWK REAAGLKQQL HYMQECHRQL MGEELSGLSV  120
KDLQNLESQL EMSLKGVRVK KEKILSEEIT QLRQKGNQMH QENLELYKKL DMIRKENAEL  180
QMKVYGPMEV DKTSSSTVHQ FTFANRYAMP APVHLQLRQP QPQNNETSVP GIKLGYVLAN  240
CVMT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.18e-92MIKC_MADS family protein