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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022776351.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 198aa MW: 23042.3 Da PI: 6.0512 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.2 | 2.5e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rqvtfskRr g++KKA+ELSvLCd+e+a++ifss+g+lye+ss XP_022776351.1 9 KRIEDKSSRQVTFSKRRSGLIKKAHELSVLCDVEIALVIFSSRGRLYEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 46 | 2.3e-16 | 73 | 163 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +e+++e ++ + L + +e L q +l +e+Lsl +L +Le+qL+++l +iR++K++l++e++ +lq+kek l+ en+ L++++e XP_022776351.1 73 HHEKESEASKDVNEALLSHTELLHIVQSQLEEPTVEQLSLMDLVHLEKQLDRALYEIRARKTQLMMESVLTLQEKEKLLKAENELLEREIE 163 4555666666666778999999999999************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MGRRKVEMKR IEDKSSRQVT FSKRRSGLIK KAHELSVLCD VEIALVIFSS RGRLYEFSSA 60 DSLAKILERY QSHHEKESEA SKDVNEALLS HTELLHIVQS QLEEPTVEQL SLMDLVHLEK 120 QLDRALYEIR ARKTQLMMES VLTLQEKEKL LKAENELLER EIEAMEKNED DRIEVVIGFS 180 HPEHLGHQNQ QQTLSLLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65060.1 | 7e-48 | MIKC_MADS family protein |