PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022776351.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 198aa    MW: 23042.3 Da    PI: 6.0512
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022776351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.22.5e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krie+ks rqvtfskRr g++KKA+ELSvLCd+e+a++ifss+g+lye+ss
  XP_022776351.1  9 KRIEDKSSRQVTFSKRRSGLIKKAHELSVLCDVEIALVIFSSRGRLYEFSS 59
                    79***********************************************96 PP

2K-box462.3e-1673163999
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                      +e+++e ++   + L + +e L   q +l    +e+Lsl +L +Le+qL+++l +iR++K++l++e++ +lq+kek l+ en+ L++++e
  XP_022776351.1  73 HHEKESEASKDVNEALLSHTELLHIVQSQLEEPTVEQLSLMDLVHLEKQLDRALYEIRARKTQLMMESVLTLQEKEKLLKAENELLEREIE 163
                     4555666666666778999999999999************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MGRRKVEMKR IEDKSSRQVT FSKRRSGLIK KAHELSVLCD VEIALVIFSS RGRLYEFSSA  60
DSLAKILERY QSHHEKESEA SKDVNEALLS HTELLHIVQS QLEEPTVEQL SLMDLVHLEK  120
QLDRALYEIR ARKTQLMMES VLTLQEKEKL LKAENELLER EIEAMEKNED DRIEVVIGFS  180
HPEHLGHQNQ QQTLSLLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65060.17e-48MIKC_MADS family protein