PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022772899.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 333aa    MW: 37492.4 Da    PI: 6.3239
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022772899.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.47.8e-28958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtfskRrng++KKA+ELSvLCd++va+i+fs++g++  +s
  XP_022772899.1  9 KRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRVSLFS 58
                    79*******************************************98776 PP
2K-box17.61.6e-07109170970
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKn 70 
                       +++ e+ qqe+ k k++i  +++ +R + Ge  e  +l + +  eq Le+ lk++R +K+
  XP_022772899.1 109 SIDSQLEEFQQEIVKCKSRIVDMEKRLRIFDGEPSEITTLSQAEYHEQILEETLKQVRLRKQ 170
                     567889**************************975555555556669*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGRVKLQIKR IENTTNRQVT FSKRRNGLIK KAYELSVLCD VDVALIMFSP SGRVSLFSGN  60
KSIEEILGRY VNLPEHERGR LRNKEFLIKA LGKLRDEADQ THQAASPVSI DSQLEEFQQE  120
IVKCKSRIVD MEKRLRIFDG EPSEITTLSQ AEYHEQILEE TLKQVRLRKQ VLQEKYSSPG  180
PPPTVQVHLP SDTAEVSGFV TGSSSSILDW IPQRDPQVHI LNFLDSNGLL PPRAQSQPVA  240
ENILPPQSTT VLHREEINVD DQLSPRSGLG NDKTMQRPEF GQVIDVNLSP WTELYPAGND  300
HIPDGQPGGR ALLELYLSQF TPSAISTMNQ HQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.11e-54MIKC_MADS family protein