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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022770327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 261aa MW: 30380.4 Da PI: 10.2269 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 90.1 | 1.1e-28 | 108 | 157 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien rqvtf kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_022770327.1 108 RIENAASRQVTFFKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 157 8***********************************************86 PP | |||||||
2 | K-box | 74.5 | 3e-25 | 177 | 256 | 8 | 87 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 +e+++++l++e+a++ k+ie Lq + R+llGe+L+s++++eLqq++qqLe+s++++R++K+++++eqie+l++k XP_022770327.1 177 TPTEQNMQHLRTESANMVKKIELLQVSRRKLLGECLGSCTVEELQQIQQQLERSVSRVRARKTQVFKEQIEQLKEKVSLE 256 37899**********************************************************************98654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MISFFTFTFL KLCFKCLLDF WCNQNSLQFI QKNILSCCVL FSLKQSNQTT AYPSVYSSWL 60 TNLYYFSVFL ASLSSNIVKK KKKRAPSVLL VFLLEGAEMV RGKTQMRRIE NAASRQVTFF 120 KRRNGLLKKA FELSVLCDAE VALIIFSPRG KLYEFASSSM QETIERYMRH TKDNRTTPTE 180 QNMQHLRTES ANMVKKIELL QVSRRKLLGE CLGSCTVEEL QQIQQQLERS VSRVRARKTQ 240 VFKEQIEQLK EKVSLEAEQS Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-75 | MIKC_MADS family protein |