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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022769492.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 245aa MW: 28351.1 Da PI: 8.7815 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 97.8 | 4.5e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+SvLCdaevaviifs++gkl+eys+ XP_022769492.1 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVAVIIFSTKGKLFEYST 59 79***********************************************96 PP | |||||||
2 | K-box | 100.6 | 2.2e-33 | 76 | 174 | 2 | 100 |
K-box 2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 ++++ ++e ++ s++ e+akLk+++e Lqr+ Rh++GedLe+ sl+eLq+LeqqL+++lk+iRs+Kn+l++e+i+elqkk k+lqe+n+ L k XP_022769492.1 76 AERQLAANEIDENGSWTLEHAKLKARMEVLQRNERHYMGEDLENSSLRELQNLEQQLDSALKHIRSRKNQLMFESISELQKKDKALQEQNNILAK 170 55666677788899********************************************************************************* PP K-box 97 klee 100 k++e XP_022769492.1 171 KVKE 174 *986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVAVIIFST KGKLFEYSTD 60 SCMERILERY ERYSYAERQL AANEIDENGS WTLEHAKLKA RMEVLQRNER HYMGEDLENS 120 SLRELQNLEQ QLDSALKHIR SRKNQLMFES ISELQKKDKA LQEQNNILAK KVKEKEKAAA 180 QQALWEQQNQ CQGSSSMLLP QPVQTFDISG TYEARSSAGR EEESNPAQHG VANALLPPWM 240 IRHFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 4e-98 | MIKC_MADS family protein |