PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022769492.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 245aa    MW: 28351.1 Da    PI: 8.7815
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022769492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.84.5e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr g+lKKA+E+SvLCdaevaviifs++gkl+eys+
  XP_022769492.1  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVAVIIFSTKGKLFEYST 59
                    79***********************************************96 PP
2K-box100.62.2e-33761742100
           K-box   2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                     ++++  ++e  ++ s++ e+akLk+++e Lqr+ Rh++GedLe+ sl+eLq+LeqqL+++lk+iRs+Kn+l++e+i+elqkk k+lqe+n+ L k
  XP_022769492.1  76 AERQLAANEIDENGSWTLEHAKLKARMEVLQRNERHYMGEDLENSSLRELQNLEQQLDSALKHIRSRKNQLMFESISELQKKDKALQEQNNILAK 170
                     55666677788899********************************************************************************* PP

           K-box  97 klee 100
                     k++e
  XP_022769492.1 171 KVKE 174
                     *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVAVIIFST KGKLFEYSTD  60
SCMERILERY ERYSYAERQL AANEIDENGS WTLEHAKLKA RMEVLQRNER HYMGEDLENS  120
SLRELQNLEQ QLDSALKHIR SRKNQLMFES ISELQKKDKA LQEQNNILAK KVKEKEKAAA  180
QQALWEQQNQ CQGSSSMLLP QPVQTFDISG TYEARSSAGR EEESNPAQHG VANALLPPWM  240
IRHFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.14e-98MIKC_MADS family protein