PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022763620.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 141aa MW: 16467 Da PI: 10.4661

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022763620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.4	3.8e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA ELS+LCd+ev +iifsst+kly+y+s XP_022763620.1 10 RIDNSTSRQVTFSKRRNGLLKKARELSILCDVEVGLIIFSSTDKLYDYAS 59 8***********************************************86 PP
2	K-box	67.5	4.5e-23	80	140	9	69
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 + +++ + +q+e+a L+++++ Lq+ +R+l+Ge+L+ Ls+k+Lq+Le+qLe slk++R kK XP_022763620.1 80 NPASEVKFWQREAASLRQQLQHLQEYHRKLMGEELSGLSVKDLQNLENQLEMSLKSVRMKK 140 678899******************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 141 aa Download sequence
MGRGKILIRR IDNSTSRQVT FSKRRNGLLK KARELSILCD VEVGLIIFSS TDKLYDYAST 60 SMKSVIDRYN NQKEHHQLMN PASEVKFWQR EAASLRQQLQ HLQEYHRKLM GEELSGLSVK 120 DLQNLENQLE MSLKSVRMKK V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	5e-75	MIKC_MADS family protein