PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022756268.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 545aa MW: 60351.3 Da PI: 6.6052

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022756268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47	6.3e-15	165	224	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022756268.1 165 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 224 57*****************666664477446***********************98 PP
2	AP2	47.1	5.9e-15	269	318	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022756268.1 269 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 318 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MNSNNWLSFP LSPTNPSLPT HLHSSQSHQL NLGLVNGSME HPFHAQEWNL INTNDTSEVP 60 KVSDFLGVSK SESPSLDLAA FNEIHQANDS DYPFQNNSIM PVQNNVVAAN NNYEFQENAN 120 NLQSLTLSMG SGSKGSTCET SGENSTNIVE APPRRTLDTF GQRTSIYRGV TRHRWTGRYE 180 AHLWDNSCRR EGQSRKGRQV YLGGYDKEEK AARAYDLAAL KYWGTSTTTN FPISNYEKEL 240 EEMKHMTRQE FVAAIRRKSS GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS 300 TEEEAAEAYD IAAIKFRGLN AVTNFDMSRY DVKAILESNT LPIGGGAAKR LKEAQALESS 360 RKREEMIALG SSFQYGSSSS SRLQAYPLLQ VPFEQPQPLL TLQNHDINSQ HTQDSSSFHQ 420 NYIQTQLQLH QQSGSYNLHQ SSQNSQFYNS YIQNNPALLH GLMNMGCSSP SVVDNNGSFT 480 GSYSGGYLGN GIGMASNSTA GNAVGSTEEL ALVKVDYDMP SEGYGGWSGE SVQGSNPGVF 540 TMWND

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MNSNNWLSFP LSPTNPSLPT HLHSSQSHQL NLGLVNGSME HPFHAQEWNL INTNDTSEVP  60
KVSDFLGVSK SESPSLDLAA FNEIHQANDS DYPFQNNSIM PVQNNVVAAN NNYEFQENAN  120
NLQSLTLSMG SGSKGSTCET SGENSTNIVE APPRRTLDTF GQRTSIYRGV TRHRWTGRYE  180
AHLWDNSCRR EGQSRKGRQV YLGGYDKEEK AARAYDLAAL KYWGTSTTTN FPISNYEKEL  240
EEMKHMTRQE FVAAIRRKSS GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS  300
TEEEAAEAYD IAAIKFRGLN AVTNFDMSRY DVKAILESNT LPIGGGAAKR LKEAQALESS  360
RKREEMIALG SSFQYGSSSS SRLQAYPLLQ VPFEQPQPLL TLQNHDINSQ HTQDSSSFHQ  420
NYIQTQLQLH QQSGSYNLHQ SSQNSQFYNS YIQNNPALLH GLMNMGCSSP SVVDNNGSFT  480
GSYSGGYLGN GIGMASNSTA GNAVGSTEEL ALVKVDYDMP SEGYGGWSGE SVQGSNPGVF  540
TMWND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein