PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022749123.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 236aa    MW: 27108.2 Da    PI: 10.1386
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022749123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.33.5e-272575151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n+  rqvtfskRr g++KKA+ELS+LCdae+a+++fs tgkl+eyss
  XP_022749123.1 25 KKIDNTAARQVTFSKRRRGLFKKAQELSTLCDAEIALLVFSATGKLFEYSS 75
                    68***********************************************96 PP
2K-box49.61.7e-171071881899
           K-box  18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     +  +a L ke+ +  +e+R+l+Ge+L+ L+l+eL++Le+ Le sl+++ ++K+e ++++i++l++k  +l een++L++++e
  XP_022749123.1 107 SSTYAMLSKEMAEKTQELRQLKGEELQGLNLEELKNLEKLLEGSLRRVIETKDERFFKEISTLKRKGAQLMEENQQLKQQME 188
                     566788888888888999*************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MLLLSTGLDK IFRWKRMTRQ KIQIKKIDNT AARQVTFSKR RRGLFKKAQE LSTLCDAEIA  60
LLVFSATGKL FEYSSTSSRQ VIERRNLQSE RIDRLDPIPS LELQLESSTY AMLSKEMAEK  120
TQELRQLKGE ELQGLNLEEL KNLEKLLEGS LRRVIETKDE RFFKEISTLK RKGAQLMEEN  180
QQLKQQMENL PRMVQAVVAQ QGQPSESIAH IHSSADPAQG YNSSDISLRL GLPFPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.12e-65MIKC_MADS family protein