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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022737336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 170aa MW: 19424 Da PI: 8.1879 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.8 | 1.8e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKK +ELSvLCdaeva+i+fs++gklye++s XP_022737336.1 9 KRIENKINRQVTFAKRRNGLLKKGYELSVLCDAEVALIVFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 30.9 | 1.1e-11 | 87 | 128 | 9 | 50 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslke 50 ++ a +s++qe+ kLk+++e Lqr+qR+llGedLe+ +l+ XP_022737336.1 87 TQVALKQSSYQEYLKLKARVEVLQRSQRNLLGEDLEDSKLNS 128 55666799***************************9876654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MGRGRDELKR IENKINRQVT FAKRRNGLLK KGYELSVLCD AEVALIVFSN RGKLYEFCSS 60 SSMMKTLEKY QRCSYGTLDT SRSISETQVA LKQSSYQEYL KLKARVEVLQ RSQRNLLGED 120 LEDSKLNSEK ELDCHNLEVE KPQSDKSKVL CEESNHSQNE VVAASLYGEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.3 | 5e-61 | MIKC_MADS family protein |