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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022733562.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 231aa MW: 26652.7 Da PI: 9.438 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.3 | 2e-28 | 20 | 69 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRr g+lKKA+ELSvLCdaeva+iifs++gkl e++s XP_022733562.1 20 RIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIIFSPRGKLCEFAS 69 8***********************************************86 PP | |||||||
2 | K-box | 88.5 | 1.2e-29 | 79 | 175 | 1 | 97 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 y+++++++ +e+++++l++e+a++ k+ie Lq R+llGe+L+s++l+eLqq+eqqLe+s++++R++K+++++eqi++lq+kek l en +L XP_022733562.1 79 YKRHTKTKPTEQNMQHLKTEAANMVKKIEILQDLRRKLLGEGLGSCTLEELQQIEQQLERSVSNVRARKTQVFKEQIDRLQEKEKILAAENAKLY 173 5667777899************************************************************************************9 PP K-box 96 kk 97 +k XP_022733562.1 174 EK 175 88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MDFWVILGAE MVRGKTQMRR IENATSRQVT FSKRRSGLLK KAFELSVLCD AEVALIIFSP 60 RGKLCEFASS SMQETIERYK RHTKTKPTEQ NMQHLKTEAA NMVKKIEILQ DLRRKLLGEG 120 LGSCTLEELQ QIEQQLERSV SNVRARKTQV FKEQIDRLQE KEKILAAENA KLYEKCVMQP 180 WKGSKEQKEN IPYNESSPNS DVETDLFIGP PEGRTKSNLQ RANPMPCIYE L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 4e-80 | MIKC_MADS family protein |