PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730031.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 208aa    MW: 24156.7 Da    PI: 10.5036
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.58.2e-29959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien +nrqv+fskRrng+lKKA+ELS+LCdaeva++ifss+gk+y ++s
  XP_022730031.1  9 KRIENPTNRQVSFSKRRNGLLKKAFELSILCDAEVALLIFSSSGKVYQFAS 59
                    79***********************************************86 PP

2K-box68.42.4e-23841711299
           K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     +++e ++ e++ Lk+ i++L   ++hl Ged+  L +++L+qLe+qL+ ++++iRs+K++++ +q   l+++ k+l+een++L+k+++
  XP_022730031.1  84 RTMEFWRSEIEELKRSINTLDARLKHLSGEDILALGMRDLKQLERQLKIGVERIRSRKSRIVSDQATLLKRRHKQLKEENTQLQKRVK 171
                     56899*******************************************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MRRGKVELKR IENPTNRQVS FSKRRNGLLK KAFELSILCD AEVALLIFSS SGKVYQFASH  60
GMDKSIAKYK REVGLPDSNN PQFRTMEFWR SEIEELKRSI NTLDARLKHL SGEDILALGM  120
RDLKQLERQL KIGVERIRSR KSRIVSDQAT LLKRRHKQLK EENTQLQKRV KLDEAQESNI  180
SSRIVGENAC SMFQQRVLQD EDLVNEAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.12e-48MIKC_MADS family protein