PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022724906.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 243aa    MW: 27827.6 Da    PI: 8.8158
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022724906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.81e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  XP_022724906.1  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
                    79***********************************************96 PP

2K-box95.86.8e-32841759100
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     + ea + s+qqe+ kLk+++e Lqr+qR+llGedL++Ls keL++Le+qL++slk+iRs++++++l+q+ +lq+ke+ l+e+nk+L+++l+e
  XP_022724906.1  84 TREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLSSKELESLERQLDSSLKQIRSTRTQYMLDQLTDLQRKEHLLNEANKTLKQRLME 175
                     455556689*******************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS  60
SSMIKTLERY QKCNYGAPET NVSTREALEI SSQQEYLKLK ARYEALQRSQ RNLLGEDLGP  120
LSSKELESLE RQLDSSLKQI RSTRTQYMLD QLTDLQRKEH LLNEANKTLK QRLMEGYQVN  180
SLQLNPNAED VGYGRQPAHQ PQGDGFFHPL ECEPTLQIGY QHDPISVVTA GPSVNNYMTG  240
WLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.11e-133MIKC_MADS family protein