PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022719791.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 297aa    MW: 33672.9 Da    PI: 8.6703
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022719791.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.82.2e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+d+++ +G g+W++ ++  g+ R++k+c++rw +yl
   XP_022719791.1 14 KGAWTKEEDKRLIDYIRVHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP

2Myb_DNA-binding59.95.7e-1967111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++T+eEdel+++++ +lG++ W++Ia +++ gRt++++k++w+++
   XP_022719791.1  67 RGNFTEEEDELIIKLHSLLGNK-WSLIAGKLP-GRTDNEIKNYWNTH 111
                      89********************.*********.************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MGRSPCCEKA HTNKGAWTKE EDKRLIDYIR VHGEGCWRSL PKAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGKLPGRT DNEIKNYWNT HIKKKLISRG  120
IDPQTHRPLN ETANTNNTAK ATDPTELDIR NAPRVSKSNF MTTPSLNFKH DEFQDKAKTE  180
SLEEGNCASS GMTTEEEQQQ LHQHKEKHPS NGQELNLELS IGISSAGKNS NSTRVSSCAN  240
SAESKPKLDN NNFQFLGQAM MANAVCLCWQ LGFQRSEICR NCQNTNGFYR YCRPLDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.12e-96MYB family protein