PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022718106.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 379aa    MW: 42728.3 Da    PI: 5.1058
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022718106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.59.6e-161663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++ Ed++l+  ++++G ++W++ ++  g+ R++k+c++rw +yl
   XP_022718106.1 16 RGPWSPAEDLRLITFIRKHGHENWRALPKQAGLLRCGKSCRLRWINYL 63
                     89******************************99************97 PP

2Myb_DNA-binding50.25.9e-1669114148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+e ++++++ lG++ W++Ia+++  gRt++++k+ w+++l
   XP_022718106.1  69 RGNFSKEEEETIIRLHETLGNK-WSKIASHLA-GRTDNEIKNVWNTHL 114
                      89********************.*********.************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MGKGRAPCCD KDKVKRGPWS PAEDLRLITF IRKHGHENWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG NFSKEEEETI IRLHETLGNK WSKIASHLAG RTDNEIKNVW NTHLKKKLAS  120
KNGNIPQKDE SKQCSMTSSA SCSSITFVSS SCGKRNLEVE HEKQWDEGSV NKMPREAFAV  180
AVSDKTQDFN AVLSNHNCSP SEEPKELSSS SMSSNITNAS QVDVSNPENQ SDSLFNFIGV  240
CDTNNISEEV NKPEISDTAF NIPLESDLDF WNMLDSLGLF QSDEIQSNEV EGNQSTNFGD  300
GYSKEAENNK WLHYLENELG LEATRNENQD NLSKDAAEPP VPDMYDMLLE PEADMGMGHH  360
HIWPSSITTQ FSYPNQIQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56160.13e-73MYB family protein