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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022718106.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MYB | ||||||||
Protein Properties | Length: 379aa MW: 42728.3 Da PI: 5.1058 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.5 | 9.6e-16 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++l+ ++++G ++W++ ++ g+ R++k+c++rw +yl XP_022718106.1 16 RGPWSPAEDLRLITFIRKHGHENWRALPKQAGLLRCGKSCRLRWINYL 63 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 5.9e-16 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e ++++++ lG++ W++Ia+++ gRt++++k+ w+++l XP_022718106.1 69 RGNFSKEEEETIIRLHETLGNK-WSKIASHLA-GRTDNEIKNVWNTHL 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence |
MGKGRAPCCD KDKVKRGPWS PAEDLRLITF IRKHGHENWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFSKEEEETI IRLHETLGNK WSKIASHLAG RTDNEIKNVW NTHLKKKLAS 120 KNGNIPQKDE SKQCSMTSSA SCSSITFVSS SCGKRNLEVE HEKQWDEGSV NKMPREAFAV 180 AVSDKTQDFN AVLSNHNCSP SEEPKELSSS SMSSNITNAS QVDVSNPENQ SDSLFNFIGV 240 CDTNNISEEV NKPEISDTAF NIPLESDLDF WNMLDSLGLF QSDEIQSNEV EGNQSTNFGD 300 GYSKEAENNK WLHYLENELG LEATRNENQD NLSKDAAEPP VPDMYDMLLE PEADMGMGHH 360 HIWPSSITTQ FSYPNQIQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56160.1 | 3e-73 | MYB family protein |