PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022717851.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 241aa    MW: 27671.1 Da    PI: 5.418
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022717851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.62.8e-131962548
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +++Ed++l+ ++k++G  +W+  +++ g+ R++k+c++rw +yl
   XP_022717851.1 19 SPDEDQKLIAYIKKYGIWNWNEMPKYAGLSRSGKSCRLRWMNYL 62
                     79**************99************************97 PP

2Myb_DNA-binding53.46.1e-1768111146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T eE+e +v++ k+lG++ W++Ia++++  Rt++++k++w++
   XP_022717851.1  68 RGNFTREEEETIVQLQKMLGNR-WSAIAAMLP-QRTDNDIKNYWNT 111
                      89********************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MVRQPSRNGT CFLQKGTRSP DEDQKLIAYI KKYGIWNWNE MPKYAGLSRS GKSCRLRWMN  60
YLRPNIKRGN FTREEEETIV QLQKMLGNRW SAIAAMLPQR TDNDIKNYWN TRLKKRVVLE  120
NNSASATTPA TEIISGIKSD ANSLFLDTLL GSPIPKLEDF PEPATCIFSA SGSNHAAVVD  180
NTCTMDDNFV SSEKYWNIQS FSDNDYCQAL SPNSQLWLYE PIYECNSNYD PVDDFWDSPF  240
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.16e-49MYB family protein