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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022717851.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MYB | ||||||||
Protein Properties | Length: 241aa MW: 27671.1 Da PI: 5.418 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.6 | 2.8e-13 | 19 | 62 | 5 | 48 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +++Ed++l+ ++k++G +W+ +++ g+ R++k+c++rw +yl XP_022717851.1 19 SPDEDQKLIAYIKKYGIWNWNEMPKYAGLSRSGKSCRLRWMNYL 62 79**************99************************97 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 6.1e-17 | 68 | 111 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T eE+e +v++ k+lG++ W++Ia++++ Rt++++k++w++ XP_022717851.1 68 RGNFTREEEETIVQLQKMLGNR-WSAIAAMLP-QRTDNDIKNYWNT 111 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MVRQPSRNGT CFLQKGTRSP DEDQKLIAYI KKYGIWNWNE MPKYAGLSRS GKSCRLRWMN 60 YLRPNIKRGN FTREEEETIV QLQKMLGNRW SAIAAMLPQR TDNDIKNYWN TRLKKRVVLE 120 NNSASATTPA TEIISGIKSD ANSLFLDTLL GSPIPKLEDF PEPATCIFSA SGSNHAAVVD 180 NTCTMDDNFV SSEKYWNIQS FSDNDYCQAL SPNSQLWLYE PIYECNSNYD PVDDFWDSPF 240 I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 6e-49 | MYB family protein |