PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022717847.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 235aa    MW: 27129.2 Da    PI: 4.8486
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022717847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52.1e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ed++l+ ++ ++G  +W+  a++ g+ R++k+c++rw +yl
   XP_022717847.1 14 KGTWSPDEDQKLITYIMRHGIWNWNEMAKYAGLSRSGKSCRLRWVNYL 61
                     799*****************99************************97 PP

2Myb_DNA-binding53.26.8e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T eE+e +v++ k+lG++ W++Ia++++  Rt++++k++w++
   XP_022717847.1  67 RGNFTREEEETIVQLQKMLGNR-WSAIAAKLP-QRTDNDIKNYWNT 110
                      89********************.*********.***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MVRQPSWDRT CLKKGTWSPD EDQKLITYIM RHGIWNWNEM AKYAGLSRSG KSCRLRWVNY  60
LRPNIKRGNF TREEEETIVQ LQKMLGNRWS AIAAKLPQRT DNDIKNYWNT RLKKGAVENN  120
SASAIASRSE INSSLDAGEE NSSDADSSMF LNNLLDSPIP TLEDFPLPAT YIFSPSDCNR  180
GAVVDDNYTM EDNFISSEKQ PQPMSPNSQL WLHDPIYVRD SDYDPVDDFW VNPFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.15e-51MYB family protein