PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022715838.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 403aa    MW: 43625.5 Da    PI: 4.9975
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022715838.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.97.6e-111452148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd++l+ +++++G g         g++R++k+c++rw +yl
   XP_022715838.1 14 RGAWTAEEDQKLIAYIQKHGEG---------GLRRCGKSCRLRWVNYL 52
                     89********************.........889************97 PP

2Myb_DNA-binding49.41e-1558102147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg +T +E + ++++++ lG++ W++Iar+++ +Rt++++k++w+ +
   XP_022715838.1  58 RGDFTSDEAQTIIELHAALGNR-WAAIARHLP-KRTDNEIKNYWNAH 102
                      899*******************.*********.***********976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MGRIPLCSAD GLKRGAWTAE EDQKLIAYIQ KHGEGGLRRC GKSCRLRWVN YLRPGVKRGD  60
FTSDEAQTII ELHAALGNRW AAIARHLPKR TDNEIKNYWN AHLKKRLVNL GIDPVTHKPV  120
GTARGTSSSE NSSTTVVNTD SMIILEENAT SKESEPTSQQ PTSSRSASAS ALLLNKLATR  180
VTTLQCVDLD PVRACQRLQT MSFNSTTNDG GANSESSTAT ICHPTSSCEG NNASIALDTS  240
DYWPVNISDP LTTPLNCLDL LNIVLSPVSA DHGNAGEEGG VSFDANIEYP DLSDALSILE  300
GNASEPARSC SSTSSRVLNN MASKFASSRC IDELYNWQNR NNISPGPIQG DHSVTTTTIG  360
DGGLSTNDIN IDDMIFDTVG SPVFYNPIYL ENELVPSNLF YIP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61420.23e-62MYB family protein