PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022715805.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 573aa    MW: 63790.2 Da    PI: 5.8608
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022715805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.61.2e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd++l+ +++++G g W++ +++ g++R++k+c++rw +yl
   XP_022715805.1 14 RGAWTAEEDQKLIAYIQKHGEGGWRSLPKKAGLRRCGKSCRLRWVNYL 61
                     89********************************************97 PP

2Myb_DNA-binding48.81.7e-1567111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg +T +E + ++++++ lG++ W++Iar+++ +Rt++++k++w+ +
   XP_022715805.1  67 RGDFTSDEAQTIIELHAALGNR-WAAIARHLP-KRTDNEIKNYWNAH 111
                      899*******************.*********.***********976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
MGRIPLCSAD GLKRGAWTAE EDQKLIAYIQ KHGEGGWRSL PKKAGLRRCG KSCRLRWVNY  60
LRPGVKRGDF TSDEAQTIIE LHAALGNRWA AIARHLPKRT DNEIKNYWNA HLKKRLVNFG  120
IDPVTHKPVG TARGTSSSEN SNTTVVNTDS MIILEENATS KESEPTSQQP TSSRSASASA  180
LLLNKLASRV TTLQCVDLDP VRTCQRLQTM SFNSTTNDGG ANSESSTATI CHPTSSCQGN  240
NASIALDTSD YWPDNISDPL TTPLNCLDLL NIVLSPVSAD HGNASDDGGV SFDANIEYPD  300
LSDALSILEG NASEPARSCS STSSRVLNNM ASKFASLRCI DELHNWQNRK NISPGPIQGD  360
HSVTTTTIGD GGLLTNGINI DDMIFDTARV DQGIRKMEVS TQKQIREVQD DSSRNDNDTT  420
RQIDRNNTRR TKLQALVEEN NNGVEVSKTT ELNDLAQLTG EREVIEYIAR VDDEVLHWLE  480
RSAIGFCKEY FEEDDLLEIK RKIGKEVIIR RLSDYSFLIT FEDEESFEFM MVKNWNVLSS  540
WFKRVEIRSE KSTSSKRGAW VTCYGIPFHA RCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.15e-69MYB family protein