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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022715805.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MYB | ||||||||
Protein Properties | Length: 573aa MW: 63790.2 Da PI: 5.8608 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.6 | 1.2e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+ +++++G g W++ +++ g++R++k+c++rw +yl XP_022715805.1 14 RGAWTAEEDQKLIAYIQKHGEGGWRSLPKKAGLRRCGKSCRLRWVNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.8 | 1.7e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T +E + ++++++ lG++ W++Iar+++ +Rt++++k++w+ + XP_022715805.1 67 RGDFTSDEAQTIIELHAALGNR-WAAIARHLP-KRTDNEIKNYWNAH 111 899*******************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 573 aa Download sequence |
MGRIPLCSAD GLKRGAWTAE EDQKLIAYIQ KHGEGGWRSL PKKAGLRRCG KSCRLRWVNY 60 LRPGVKRGDF TSDEAQTIIE LHAALGNRWA AIARHLPKRT DNEIKNYWNA HLKKRLVNFG 120 IDPVTHKPVG TARGTSSSEN SNTTVVNTDS MIILEENATS KESEPTSQQP TSSRSASASA 180 LLLNKLASRV TTLQCVDLDP VRTCQRLQTM SFNSTTNDGG ANSESSTATI CHPTSSCQGN 240 NASIALDTSD YWPDNISDPL TTPLNCLDLL NIVLSPVSAD HGNASDDGGV SFDANIEYPD 300 LSDALSILEG NASEPARSCS STSSRVLNNM ASKFASLRCI DELHNWQNRK NISPGPIQGD 360 HSVTTTTIGD GGLLTNGINI DDMIFDTARV DQGIRKMEVS TQKQIREVQD DSSRNDNDTT 420 RQIDRNNTRR TKLQALVEEN NNGVEVSKTT ELNDLAQLTG EREVIEYIAR VDDEVLHWLE 480 RSAIGFCKEY FEEDDLLEIK RKIGKEVIIR RLSDYSFLIT FEDEESFEFM MVKNWNVLSS 540 WFKRVEIRSE KSTSSKRGAW VTCYGIPFHA RCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15310.1 | 5e-69 | MYB family protein |