![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021690812.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 252aa MW: 28796.6 Da PI: 8.7747 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.8 | 6.1e-19 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 +g+WT eEd+ll ++vk++G g+W+++ar+ ++R++k+c++rw +yl XP_021690812.1 14 KGPWTLEEDKLLSEYVKLHGEGRWSSVARCAVgLNRSGKSCRLRWVNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.9 | 1.7e-16 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++++G++ W+tIar+++ gRt++++k++w+++ XP_021690812.1 68 RGQITPQEEGIIIELHALWGNK-WSTIARYLP-GRTDNEIKNYWRTH 112 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 252 aa Download sequence |
MMGWGDFPQQ GWRKGPWTLE EDKLLSEYVK LHGEGRWSSV ARCAVGLNRS GKSCRLRWVN 60 YLRPGLKRGQ ITPQEEGIII ELHALWGNKW STIARYLPGR TDNEIKNYWR THFMKREKSS 120 NQKQEKQKAQ VLNKKLQLQQ EQEQQKQLGV DKTKAIDITN EGKIHEAQEK QEMVCMYPTL 180 GDHCLPVMSQ DVASWADFVV DDGLLWGGLW NLDDQVCHTS NCSKIAKQNQ ATAFSFGGGS 240 NNAYSSTGGY IF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G30210.1 | 8e-66 | MYB family protein |