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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021689940.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 313aa MW: 34309.3 Da PI: 6.1548 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.2e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++++ +G+g +W + +++ g++R++k+c++rw++yl XP_021689940.1 14 RGPWSPEEDATLKRYFETHGTGgNWIALPKKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.1 | 2.3e-14 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd+++ + q+G++ W++I ++++ gRt++++k++w++ XP_021689940.1 69 GGFTEEEDKIIFTLYSQMGSR-WSLITSHLP-GRTDNDVKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDATLKRYFE THGTGGNWIA LPKKAGLKRC GKSCRLRWLN 60 YLRPDIKHGG FTEEEDKIIF TLYSQMGSRW SLITSHLPGR TDNDVKNYWN TKLKKKLLLG 120 GKTSLAIKNN TEIIAPSDNS NSTAPSFTPS LPCVFPKTET NSSLTFWDSL TQSSVTLPIS 180 SDAGYDQHLL NTAQSLSLDP VDQFSYTAGV MDNVSELGSN LINNHNIVSC SQEGSGISDS 240 SSISMDHNNK CLSMTDGVLM DSGFGYHYDP ATALLFEDNA GEVASTCCPN LAGFGYADIK 300 DQQGYNQNAI NQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 5e-67 | MYB family protein |