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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021688428.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 255aa MW: 29038.9 Da PI: 6.8738 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.3 | 4.3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRr+g+lKKA+EL +LCdaevaviifs+tgkl+e+ss XP_021688428.1 9 KRIENANSRQVTFSKRRTGLLKKAQELAILCDAEVAVIIFSNTGKLFEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 71.7 | 2.2e-24 | 77 | 172 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ ++e + +++ ++e++ Lk+ei++Lq +q llG+dL+ LslkeLq+LeqqL+++l +++kK++ll+eq+e+++ +e+++ en++Lr+++e XP_021688428.1 77 ESARVEYKAEKQDSKEVDVLKEEIDKLQAKQLMLLGQDLTGLSLKELQHLEQQLNEGLLCVKEKKEHLLMEQLEQSRVQEQRAMLENETLRRQVE 171 4555777888999********************************************************************************98 PP K-box 100 e 100 e XP_021688428.1 172 E 172 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MGRGKIEIKR IENANSRQVT FSKRRTGLLK KAQELAILCD AEVAVIIFSN TGKLFEFSSS 60 GMKRTLARYN KCIDSTESAR VEYKAEKQDS KEVDVLKEEI DKLQAKQLML LGQDLTGLSL 120 KELQHLEQQL NEGLLCVKEK KEHLLMEQLE QSRVQEQRAM LENETLRRQV EELRCFFPST 180 DHSVPTYHEY YSVERKHSLV NNGSASPDTA YNCSMEKGDS DTTLHLGLPT DAYRKRKAPE 240 GESHSNDSGS QLVLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 4e-94 | MIKC_MADS family protein |