PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021688105.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CAMTA

Protein Properties

Length: 1085aa MW: 121864 Da PI: 6.3094

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021688105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.2	4.3e-55	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ k+rwl++ ei++iL n++k++++ e+++ p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+e n++fqr XP_021688105.1 20 VEAKHRWLRPAEICEILRNYKKFRIAPEPQHMPSSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKSGSVDVLHCYYAHGEGNENFQR 114 6779***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Leeel++ivlvhy++vk XP_021688105.1 115 RSYWMLEEELSHIVLVHYRDVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1085 aa Download sequence
MAEARGYPLG NQLDIQQILV EAKHRWLRPA EICEILRNYK KFRIAPEPQH MPSSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKSGSVDVLH CYYAHGEGNE NFQRRSYWML 120 EEELSHIVLV HYRDVKGNKA NFNHVKEHEE AIPYPHEIED TIPHSEMETS VSSNFHHDNY 180 QVPAQTTDTI SMNSAQASEY EDAESGYNHQ ASSGLHSFIE VQQPAREKID AGLLGHHDPV 240 SFSSSYQGKL SAVPGRDFFS LAHADKAEDT KGAGLTYQPL KHFNLPSWEN VLENYAPGIE 300 AASLQPPFSS PVDTAGILPK QEDEILKQLL VNSLPLQKEW QNFEDASSHL SKWAMDQKLH 360 PNSTADLTTS FHEQELVSGD LTNALELFRT HGTGHPAQND VQIQWNTEQS ITPEGKSIYS 420 SSVKQRLLDR SLSEEGLKKL DSFNRWMSKE LGDVNESHMQ TSSGPYWDTV ENENGIDDPK 480 IPSQAHLDTY VLGPSLSQDQ FFSIIDFSPN WAYVGSEIKV LITGRFLKSR EEAENCKWSC 540 MFGEVEVQAE VIADGVLRCQ TPLNKAGMVP FYVTCSDRVA CSEVREFEYR VSHIQDVNIT 600 DCFSSRSFIM RFGKLLSLNS FSLPKCNTSN IVENTQLSNK ISSLLEEDNE EWDQMLKRSS 660 EAGVSLEKVK EELLQKLLKD RLHAWLLQKA AEGGKGPSVL DEGGQGVLHF AAALGYDWAL 720 EPTIIAGVSV NFRDMNGWTA LHWAASCGSE RTVVSLVILG AAPGALTDPT PKYPTGRTPA 780 DLASANGHKG IAGYLAESAL SAHLSSLNLD KQDGDVAGVS GAKTVQIVPE HGTFVTSDGD 840 LSYGLPLKDS LAAVCNATQA VARIHEVFRV QSFQKKQLKE LGDDKYGMSN ECALSFIAVK 900 ALKPGQHDEP VHAAAIRIQN KFRSWKGRKE FLIIRQRIVK IQAHVRGHQV RKNYRKIVWS 960 VGIVEKVILR WRRKRSGLRG FKSEALIEGP SKQDTLSKED DYDFFKEGRK QTEARSQIAL 1020 ARVKSMHQYP EARDQYRRLL NAVTEIQENK TLYDRINNSE ATAEFDDLID LEALLDDDAV 1080 MPTAS

Sequence ? help Back to Top

Protein Sequence Length: 1085 aa Download sequence

MAEARGYPLG NQLDIQQILV EAKHRWLRPA EICEILRNYK KFRIAPEPQH MPSSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKSGSVDVLH CYYAHGEGNE NFQRRSYWML  120
EEELSHIVLV HYRDVKGNKA NFNHVKEHEE AIPYPHEIED TIPHSEMETS VSSNFHHDNY  180
QVPAQTTDTI SMNSAQASEY EDAESGYNHQ ASSGLHSFIE VQQPAREKID AGLLGHHDPV  240
SFSSSYQGKL SAVPGRDFFS LAHADKAEDT KGAGLTYQPL KHFNLPSWEN VLENYAPGIE  300
AASLQPPFSS PVDTAGILPK QEDEILKQLL VNSLPLQKEW QNFEDASSHL SKWAMDQKLH  360
PNSTADLTTS FHEQELVSGD LTNALELFRT HGTGHPAQND VQIQWNTEQS ITPEGKSIYS  420
SSVKQRLLDR SLSEEGLKKL DSFNRWMSKE LGDVNESHMQ TSSGPYWDTV ENENGIDDPK  480
IPSQAHLDTY VLGPSLSQDQ FFSIIDFSPN WAYVGSEIKV LITGRFLKSR EEAENCKWSC  540
MFGEVEVQAE VIADGVLRCQ TPLNKAGMVP FYVTCSDRVA CSEVREFEYR VSHIQDVNIT  600
DCFSSRSFIM RFGKLLSLNS FSLPKCNTSN IVENTQLSNK ISSLLEEDNE EWDQMLKRSS  660
EAGVSLEKVK EELLQKLLKD RLHAWLLQKA AEGGKGPSVL DEGGQGVLHF AAALGYDWAL  720
EPTIIAGVSV NFRDMNGWTA LHWAASCGSE RTVVSLVILG AAPGALTDPT PKYPTGRTPA  780
DLASANGHKG IAGYLAESAL SAHLSSLNLD KQDGDVAGVS GAKTVQIVPE HGTFVTSDGD  840
LSYGLPLKDS LAAVCNATQA VARIHEVFRV QSFQKKQLKE LGDDKYGMSN ECALSFIAVK  900
ALKPGQHDEP VHAAAIRIQN KFRSWKGRKE FLIIRQRIVK IQAHVRGHQV RKNYRKIVWS  960
VGIVEKVILR WRRKRSGLRG FKSEALIEGP SKQDTLSKED DYDFFKEGRK QTEARSQIAL  1020
ARVKSMHQYP EARDQYRRLL NAVTEIQENK TLYDRINNSE ATAEFDDLID LEALLDDDAV  1080
MPTAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein