PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021687683.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 264aa    MW: 30424.9 Da    PI: 4.9771
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021687683.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.21.1e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l  ++ ++G  +W+  +++ g+ R++k+c++rw +yl
   XP_021687683.1 14 KGAWSPEEDYKLRAYIMRYGHWNWRELPKYAGLQRCGKSCRLRWMNYL 61
                     79******************99************************97 PP
2Myb_DNA-binding56.37.4e-1868112248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g+ ++eE++l+++++kqlG++ W++Ia+ ++ gRt++++k++w+++l
   XP_021687683.1  68 GNYSKEEEDLIIKLHKQLGNK-WSRIAAQLP-GRTDNEIKNYWHTHL 112
                      789******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MVRAPYFDKN GLKKGAWSPE EDYKLRAYIM RYGHWNWREL PKYAGLQRCG KSCRLRWMNY  60
LRSGVKHGNY SKEEEDLIIK LHKQLGNKWS RIAAQLPGRT DNEIKNYWHT HLKKLTKESN  120
SEPGLKEDYS MEQPSETSQC EVISKNGDLK VEKFVPDTPS HGILESSPLS PEPSSSELSH  180
WTSDSALVTV SSTSSSSDWI AEDSLPSFET FENTSEDFWT QPFVADQDGY RLPMLEDGLV  240
SSFLTSYEDS IDLFYQVMQE LPEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.15e-56MYB family protein