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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021687683.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 264aa MW: 30424.9 Da PI: 4.9771 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.2 | 1.1e-14 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l ++ ++G +W+ +++ g+ R++k+c++rw +yl XP_021687683.1 14 KGAWSPEEDYKLRAYIMRYGHWNWRELPKYAGLQRCGKSCRLRWMNYL 61 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 56.3 | 7.4e-18 | 68 | 112 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+ ++eE++l+++++kqlG++ W++Ia+ ++ gRt++++k++w+++l XP_021687683.1 68 GNYSKEEEDLIIKLHKQLGNK-WSRIAAQLP-GRTDNEIKNYWHTHL 112 789******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 264 aa Download sequence |
MVRAPYFDKN GLKKGAWSPE EDYKLRAYIM RYGHWNWREL PKYAGLQRCG KSCRLRWMNY 60 LRSGVKHGNY SKEEEDLIIK LHKQLGNKWS RIAAQLPGRT DNEIKNYWHT HLKKLTKESN 120 SEPGLKEDYS MEQPSETSQC EVISKNGDLK VEKFVPDTPS HGILESSPLS PEPSSSELSH 180 WTSDSALVTV SSTSSSSDWI AEDSLPSFET FENTSEDFWT QPFVADQDGY RLPMLEDGLV 240 SSFLTSYEDS IDLFYQVMQE LPEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 5e-56 | MYB family protein |