PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021686251.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 247aa    MW: 27929.4 Da    PI: 8.4636
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021686251.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.11.7e-31958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gk+ye+ 
  XP_021686251.1  9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKVYEFG 58
                    79**********************************************95 PP

2K-box76.85.6e-2680175999
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqi.....eelqkkekelqeenkaLrkkl 98 
                       e++++s++qe++kLk+++e+Lq +qRhllGedL++Ls+keLq+Le+qLe +l   R++K +l+  +i         +ke+ l + nk+L+ kl
  XP_021686251.1  80 SVERETQSWYQEATKLKAKYESLQLTQRHLLGEDLGPLSVKELQNLEKQLEVALALARQRKVDLYSLSIxppmiXFALEKERHLGDLNKQLKFKL 174
                     456789********************************************************999876511111567788888888888888777 PP

           K-box  99 e 99 
                     e
  XP_021686251.1 175 E 175
                     6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKVYEFGSA  60
GTTKTLERYQ RCCFTPQDNS VERETQSWYQ EATKLKAKYE SLQLTQRHLL GEDLGPLSVK  120
ELQNLEKQLE VALALARQRK VDLYSLSIXP PMIXFALEKE RHLGDLNKQL KFKLEAEGQS  180
LAIQDLWNCG AADGNSNFAL HASQSNPLDC DPGPVLQIGY HHFVQAEGSS VPRSMASETN  240
FMQGWVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.11e-101MIKC_MADS family protein