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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021686251.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 247aa MW: 27929.4 Da PI: 8.4636 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.1 | 1.7e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gk+ye+ XP_021686251.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKVYEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 76.8 | 5.6e-26 | 80 | 175 | 9 | 99 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqi.....eelqkkekelqeenkaLrkkl 98 e++++s++qe++kLk+++e+Lq +qRhllGedL++Ls+keLq+Le+qLe +l R++K +l+ +i +ke+ l + nk+L+ kl XP_021686251.1 80 SVERETQSWYQEATKLKAKYESLQLTQRHLLGEDLGPLSVKELQNLEKQLEVALALARQRKVDLYSLSIxppmiXFALEKERHLGDLNKQLKFKL 174 456789********************************************************999876511111567788888888888888777 PP K-box 99 e 99 e XP_021686251.1 175 E 175 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKVYEFGSA 60 GTTKTLERYQ RCCFTPQDNS VERETQSWYQ EATKLKAKYE SLQLTQRHLL GEDLGPLSVK 120 ELQNLEKQLE VALALARQRK VDLYSLSIXP PMIXFALEKE RHLGDLNKQL KFKLEAEGQS 180 LAIQDLWNCG AADGNSNFAL HASQSNPLDC DPGPVLQIGY HHFVQAEGSS VPRSMASETN 240 FMQGWVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 1e-101 | MIKC_MADS family protein |