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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021686196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 332aa MW: 37646.6 Da PI: 7.2626 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.9 | 1.1e-18 | 34 | 81 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_021686196.1 34 RGPWTAEEDFKLINYIAAYGEGRWNSLARCAGLKRTGKSCRLRWLNYL 81 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1e-15 | 87 | 130 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++ +++++ ++G++ W++Ia++++ gRt++++k++w++ XP_021686196.1 87 RGNITLEEQLMILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 130 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MMDVKGRNSN HKNSSSSSSS STTQSEEEMG DLRRGPWTAE EDFKLINYIA AYGEGRWNSL 60 ARCAGLKRTG KSCRLRWLNY LRPDVRRGNI TLEEQLMILE LHSRWGNRWS KIAQHLPGRT 120 DNEIKNYWRT RVQKHAKQLK CDVNSKQFKD TMRYLWMPRL MERIQAANTT ATSTSTATAV 180 VPTIDGTITE ATHHHHLINS TITEATHHHH LINSTNTDMG SGQWAVAHVG SEFGVAHVTP 240 STYTTPETSS TAASSDSLRN QVSPNDYYGI SVNPDYFQSG QVGYSESMIS PSGYFNQVSD 300 FPAMEHNNNQ FWVDGGDTSY NLWNVEDIWF NM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06490.1 | 3e-87 | MYB family protein |