PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021685327.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 428aa MW: 48043.1 Da PI: 6.5184

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021685327.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl XP_021685327.1 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	45.2	2.1e-14	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_021685327.1 67 RGNFTPHEEGMIIHLQALLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY 60 LRPGIKRGNF TPHEEGMIIH LQALLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKLKKFQ 120 SALDHPMAAQ DSSTTTTTNQ FVSKSFSERS RFLNLSPNSS TLKLNQTSPT YASSTENISR 180 LLEGWMRTSP KPNNNHGTND LFKENWNQNS NNSENPEGNV SIPVATTSRQ CYRPKAEQEN 240 GGGGGLISHE EFESILSFDK YASSTENISR LLEGWMRTSP KPNNNHDTND LFKEKWNQNS 300 NNLENPEGNV SIPVATTSRQ CYRSKAEQEN GGGGGLISHE EFESILSFDN LNNVAWDKSN 360 RDSTNNISAV KGIHQDSASE EKENDIIAEA EKKQKSDSNP PLSFLEKWLL EETGAGQVEE 420 SMELSSIF

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TPHEEGMIIH LQALLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKLKKFQ  120
SALDHPMAAQ DSSTTTTTNQ FVSKSFSERS RFLNLSPNSS TLKLNQTSPT YASSTENISR  180
LLEGWMRTSP KPNNNHGTND LFKENWNQNS NNSENPEGNV SIPVATTSRQ CYRPKAEQEN  240
GGGGGLISHE EFESILSFDK YASSTENISR LLEGWMRTSP KPNNNHDTND LFKEKWNQNS  300
NNLENPEGNV SIPVATTSRQ CYRSKAEQEN GGGGGLISHE EFESILSFDN LNNVAWDKSN  360
RDSTNNISAV KGIHQDSASE EKENDIIAEA EKKQKSDSNP PLSFLEKWLL EETGAGQVEE  420
SMELSSIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	2e-98	MYB family protein