PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021684016.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 285aa MW: 32908.3 Da PI: 7.5389

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021684016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.7	5.6e-18	9	56	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd ll + v+++G g+W++++++ g++R++k+c++rw++yl XP_021684016.1 9 KGAWTSEEDNLLRNWVEKHGEGRWHLVPSRAGLNRCRKSCRLRWLNYL 56 79********************************************97 PP
2	Myb_DNA-binding	40.6	5.9e-13	62	113	1	46
TSSS-HHHHHHHHHHHHHTTTT.......-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.......tWktIartmgkgRtlkqcksrwqk 46 rg + ++E +l+++++k+lG++ +W++I+ +++ gRt++++k++w++ XP_021684016.1 62 RGEFAEDEVDLIIKLHKLLGNRgslllvpRWSLISGRLP-GRTANDIKNFWNT 113 78999********************************.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MEGPKGVRKG AWTSEEDNLL RNWVEKHGEG RWHLVPSRAG LNRCRKSCRL RWLNYLKPNI 60 NRGEFAEDEV DLIIKLHKLL GNRGSLLLVP RWSLISGRLP GRTANDIKNF WNTRMRKKIT 120 YCEEDAKPKT PNVKKTNIIR PQPWKLKNMS STTVNNAPMK LLQEPHGSNT HENARMVHGG 180 GVAPAYNNLC EHSMAFPLPR SYNEDVCEKI LDKKEINQFN GSTTEPFAEE NATGTDAVDT 240 FFEEGQMTKG MNDFYEEDWW IEFSSDIDLW KLLSEEQETS IDKIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-55	MYB family protein