PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021680699.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 336aa MW: 36994 Da PI: 8.1396

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021680699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.6e-17	31	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell +++++ G g+W+t +++ g+ R++k+c++rw +yl XP_021680699.1 31 RGPWTPEEDELLSNYIRKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 78 89****************************99**********97 PP
2	Myb_DNA-binding	46.9	6.4e-15	89	129	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_021680699.1 89 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 129 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MRNPLTSASS GGAQAATTAK TPCCSKVGLK RGPWTPEEDE LLSNYIRKEG EGRWRTLPKR 60 AGLLRCGKSC RLRWMNYLRP SVKRGQIAPD EEDLILRLHR LLGNRWSLIA GRIPGRTDNE 120 IKNYWNTHLS KKLISQGIDP RTHKPLNPES VDQNKASSSK ATNRNASSPK SSNNKNPAPA 180 AAGVEETTSG GSTQIISNEQ NLYIENTSLD HHYHINGNNN NASHGYSSLL NCGDGTCGMY 240 LRSNVQGLNN EEDEDINYGT DDVFSSFLNS IINEEAFTSQ QHQQMQQQAD LIVPSSDPLV 300 SISTASTIGG GSSWESVLMS STFNRNDPIK KVNDHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	2e-83	MYB family protein