PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679485.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 333aa MW: 37273.7 Da PI: 6.1814

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679485.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+lv+ ++ +G g+W+++++ g+ R++k+c++rw +yl XP_021679485.1 13 RGLWSPEEDEKLVNHITTYGHGSWSSVPKLAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP
2	Myb_DNA-binding	53.7	4.9e-17	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+++++d+++ lG++ W+ Ia++++ gRt++++k++w++ XP_021679485.1 66 RGSFSEQEEQIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 899*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MGHRCCSKQK VKRGLWSPEE DEKLVNHITT YGHGSWSSVP KLAGLQRCGK SCRLRWINYL 60 RPDLKRGSFS EQEEQIIIDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLISQGL 120 DPKTHNLIPS HQRANNNKVA AENILQSHQP PFSIITLNLQ MTDASMEMNP PILTLPAAPS 180 SNSIHQPPSM QTSSVPIFTS GDHHNPNIPW TVNDHQNSLD STIFPYVSSF QNTAISSSSS 240 SVNPSGFGLL DENCFWGHNT IAENFEAPRM EVLQAQEQEN NQATEEVDAA KGVQDMDASF 300 DGSSFGLEFV ESTLLSSSMC RELDSMDDLA WNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	1e-88	MYB family protein