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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021677202.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 1010aa MW: 113356 Da PI: 5.0292 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43 | 1e-13 | 8 | 53 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_021677202.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78*****************************.************986 PP | |||||||
2 | Myb_DNA-binding | 32.7 | 1.7e-10 | 60 | 103 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_021677202.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68*****************99.********8..**********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1010 aa Download sequence |
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACVKD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKRPP PGFFDVADED RPVEQPKFPT 240 TIEELEGKRR VDVEAQLRKQ DIAKNKIAQR QDAPSAILQA NKLNDPETVR KRSKLMLPAP 300 QISDHELEEI ARMGYASDLL AGGEALTEGS GATRALLANY AQTPQQGMIP FRTPQRTPAG 360 KGDAIMMEAE NLARLRESQT PLLGGENPEL HPSDFSGVTP KKREIQTPNP MLTPSATPGG 420 AGFTPRISMT PSRDGYSFGM TPKGTPIRDE LNINEDMDMH DSAKLERQRQ ADLRRNLRSG 480 LSNLPQPKNE YQIVIQPPPE DQEEPEEKIE EDMSDRIARE KAVEEARQQA LLRKRSKVLQ 540 RELPRPPAAS LELIRNSLLR ADEDKSSFVP PTLTELADEM IRKELLALLD HDNAKYPLDE 600 KLSKEKKKGV KRAAVSVPVI EDFEEDELKE ADNLIKEEAQ YIRVAMGHES ESLDAFVDAH 660 KTCLNDLMYF PTRNAYGLSS VAGNVEKLAA LQNEFDNVKM RLEIEREKAL RLEKKVNVLT 720 QGYQTRSERQ LLPPIESILK QMDTAGTELE CFQALRKQEQ LAASHRINGL WEEVQKQKEL 780 EQTLQRRYGS LVAELERIQH LITDYRTLAK QLEEIAAKNR ALELAESAAK QAAIQNSETS 840 EPMFSDNLGS SMLVNSSNEI PEQQTNAVQD DFHASLKHGI NADSENEHAP MDTDVSISTD 900 VPSVVEGLHT AQNLIMQGDN LSDVVVAEGN NLNGESVNGN AGGIAISAEA TEDGAVAEDQ 960 QIVMEATKPD GVAIKQGESG EDERAKSTKD EINVANSEQA TADEDGGREL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 205 | KRRELKAAGIDTRQRKRKRK |
2 | 200 | 205 | RKRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09770.1 | 0.0 | MYB family protein |