PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676112.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 460aa MW: 51283.7 Da PI: 7.7835

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676112.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ ++++G g+W+++++ g+ R++k+c++rw +yl XP_021676112.1 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	44.3	4.2e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ XP_021676112.1 67 RGTFSQQEENLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY 60 LRPDLKRGTF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG 120 IDPVTHKPLS EVENNGQDKN PPANKSQDKA SGVSNELNLL EANNSKRGSN LQEKQQSPVS 180 AQAYQWEGEG SSNSKTMSSN TNNHSNNSNL MTPISNKDFF LERFATSHHE GSTSNCQASD 240 LVGHFPLQQL NYASHARLTN NSIPSLWFTQ TSKSLDMNSE FSSSSITTIL PPTTSSFLST 300 SLAFKPSVTV PSDDPSLASF PISSSRFWEA GAPSNNSNSS TGSSGNAELQ SNSSFFESTI 360 FSWGLGDCSS TEKEGQNQLM GSQQEDVKWP EYLHNPLMMA AALQNQSPQS VYNEIKSEAH 420 FLSENSSGMW PQNQQQQEPF QTSYICPKDF QRLTAAYGHI

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKQAGLQRCG KSCRLRWINY  60
LRPDLKRGTF SQQEENLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPVTHKPLS EVENNGQDKN PPANKSQDKA SGVSNELNLL EANNSKRGSN LQEKQQSPVS  180
AQAYQWEGEG SSNSKTMSSN TNNHSNNSNL MTPISNKDFF LERFATSHHE GSTSNCQASD  240
LVGHFPLQQL NYASHARLTN NSIPSLWFTQ TSKSLDMNSE FSSSSITTIL PPTTSSFLST  300
SLAFKPSVTV PSDDPSLASF PISSSRFWEA GAPSNNSNSS TGSSGNAELQ SNSSFFESTI  360
FSWGLGDCSS TEKEGQNQLM GSQQEDVKWP EYLHNPLMMA AALQNQSPQS VYNEIKSEAH  420
FLSENSSGMW PQNQQQQEPF QTSYICPKDF QRLTAAYGHI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	8e-97	MYB family protein