PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021675652.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 649aa    MW: 74442.6 Da    PI: 6.8069
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021675652.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.61.2e-07461502240
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                      ++W +eE ell ++ +++++g   +W+ I++++g+gR+ +++
   XP_021675652.1 461 KPWGKEEIELLRKGMQKYPKGtsrRWEVISEYIGTGRSVEEI 502
                      69***********************************99876 PP

2Myb_DNA-binding27.29.1e-09592636345
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 
                      +W++  +  lv+a k ++ +   +W+++a+ ++ g+t +qck ++ 
   XP_021675652.1 592 AWSAVQERALVQALKTFPREtsqRWERVAAAVP-GKTVNQCKKKFA 636
                      8*****************88*************.********9985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 649 aa     Download sequence    
MAVHSRLRLI SYSQELVDGQ PVYVSSNSLP IKALKFEPAG HAFHTAALKL LGCEEEDADS  60
EDQKASNEKE QAYMPSYDSY SSKGKKKSGI GDKQQDHYAL LGLGHLRYLA TEEQIRKSYR  120
EVALKYHPDK QAALLLAEET EAAKQAKKEE IESHFKSIQE AYEFLIDPVK RRIYDSTDEF  180
DDEIPTDCAS HDFFRVFGPA FMRNGRWSVN QPVPSLGDDN TPLKEVENFY DFWYSFKSWR  240
EFPHADEFDL EQAESREHKR WMERQNAKLS EKARKEEYVR IRTLVDNAYR RDPRILRRKE  300
EEKAEKQRKK EAKFLAKKLQ EEEAARAAEE EKRRKEEEER CAAEAALQQK KLKEKEKKLL  360
RKERTRLRTL SASILCRHLL DLFEDDVENL CLSLDIEQLR NICDEMEGKN LLEQAKVLRD  420
AGGSSHDSES NIQDEKKNVQ QNGSAVSDGS VPLSSLEKKE KPWGKEEIEL LRKGMQKYPK  480
GTSRRWEVIS EYIGTGRSVE EILKATKTVL LQKPDTAKAF DSFLEKRKPA QSIASPLTTR  540
EEMEGSATKQ GPESSAAKMD NSEESSSISE NNKKPDEGVA ENGVSLSSEQ DAWSAVQERA  600
LVQALKTFPR ETSQRWERVA AAVPGKTVNQ CKKKFALLKD NFRNKKNAV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1332355KRRKEEEERCAAEAALQQKKLKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.11e-125MYB family protein