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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021675652.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 649aa MW: 74442.6 Da PI: 6.8069 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.6 | 1.2e-07 | 461 | 502 | 2 | 40 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 ++W +eE ell ++ +++++g +W+ I++++g+gR+ +++ XP_021675652.1 461 KPWGKEEIELLRKGMQKYPKGtsrRWEVISEYIGTGRSVEEI 502 69***********************************99876 PP | |||||||
2 | Myb_DNA-binding | 27.2 | 9.1e-09 | 592 | 636 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +W++ + lv+a k ++ + +W+++a+ ++ g+t +qck ++ XP_021675652.1 592 AWSAVQERALVQALKTFPREtsqRWERVAAAVP-GKTVNQCKKKFA 636 8*****************88*************.********9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 649 aa Download sequence |
MAVHSRLRLI SYSQELVDGQ PVYVSSNSLP IKALKFEPAG HAFHTAALKL LGCEEEDADS 60 EDQKASNEKE QAYMPSYDSY SSKGKKKSGI GDKQQDHYAL LGLGHLRYLA TEEQIRKSYR 120 EVALKYHPDK QAALLLAEET EAAKQAKKEE IESHFKSIQE AYEFLIDPVK RRIYDSTDEF 180 DDEIPTDCAS HDFFRVFGPA FMRNGRWSVN QPVPSLGDDN TPLKEVENFY DFWYSFKSWR 240 EFPHADEFDL EQAESREHKR WMERQNAKLS EKARKEEYVR IRTLVDNAYR RDPRILRRKE 300 EEKAEKQRKK EAKFLAKKLQ EEEAARAAEE EKRRKEEEER CAAEAALQQK KLKEKEKKLL 360 RKERTRLRTL SASILCRHLL DLFEDDVENL CLSLDIEQLR NICDEMEGKN LLEQAKVLRD 420 AGGSSHDSES NIQDEKKNVQ QNGSAVSDGS VPLSSLEKKE KPWGKEEIEL LRKGMQKYPK 480 GTSRRWEVIS EYIGTGRSVE EILKATKTVL LQKPDTAKAF DSFLEKRKPA QSIASPLTTR 540 EEMEGSATKQ GPESSAAKMD NSEESSSISE NNKKPDEGVA ENGVSLSSEQ DAWSAVQERA 600 LVQALKTFPR ETSQRWERVA AAVPGKTVNQ CKKKFALLKD NFRNKKNAV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 332 | 355 | KRRKEEEERCAAEAALQQKKLKEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11450.1 | 1e-125 | MYB family protein |