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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021675407.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 324aa MW: 37008.4 Da PI: 4.9887 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.8 | 1.4e-14 | 5 | 52 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l+ ++ ++G +W+ ++ g+ R++k+c++rw +yl XP_021675407.1 5 KGKWSPEEDQKLIAYISRYGIWNWNEMPKAAGLPRSGKSCRLRWMNYL 52 79******************99**********99************97 PP | |||||||
2 | Myb_DNA-binding | 53 | 7.6e-17 | 58 | 102 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++++eE++ +++++k +G++ W++Ia++++ gRt++++k++w++ XP_021675407.1 58 RGNFSKEEEDTIYKLHKIMGNR-WSAIAARLP-GRTDNDIKNYWNSN 102 89********************.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MALKKGKWSP EEDQKLIAYI SRYGIWNWNE MPKAAGLPRS GKSCRLRWMN YLRPNIKRGN 60 FSKEEEDTIY KLHKIMGNRW SAIAARLPGR TDNDIKNYWN SNLRKRLNNT ASAASREMKM 120 HLSEGTGPIS TVPKALVAES SKEIPDSSSS NFVSGIDKNQ ALGQNTNVGL SKVYRDFEGL 180 QGQSFSAEGL HVMEDDGATL YSFASDNDLF GYFPLLSYEN QAIDLENFDL SGELQFHSQY 240 GQLFPLEGLH IVQDNKANTY QIWHEEPVYS YKYCNDLFDY PSLWSDQYQI MTQENSMSSE 300 LSGEIIIESL WEQPCSMIEG LYTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G05100.1 | 1e-52 | MYB family protein |