PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021675407.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 324aa    MW: 37008.4 Da    PI: 4.9887
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021675407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.81.4e-14552148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd++l+ ++ ++G  +W+  ++  g+ R++k+c++rw +yl
   XP_021675407.1  5 KGKWSPEEDQKLIAYISRYGIWNWNEMPKAAGLPRSGKSCRLRWMNYL 52
                     79******************99**********99************97 PP

2Myb_DNA-binding537.6e-1758102147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++++eE++ +++++k +G++ W++Ia++++ gRt++++k++w++ 
   XP_021675407.1  58 RGNFSKEEEDTIYKLHKIMGNR-WSAIAARLP-GRTDNDIKNYWNSN 102
                      89********************.*********.***********976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MALKKGKWSP EEDQKLIAYI SRYGIWNWNE MPKAAGLPRS GKSCRLRWMN YLRPNIKRGN  60
FSKEEEDTIY KLHKIMGNRW SAIAARLPGR TDNDIKNYWN SNLRKRLNNT ASAASREMKM  120
HLSEGTGPIS TVPKALVAES SKEIPDSSSS NFVSGIDKNQ ALGQNTNVGL SKVYRDFEGL  180
QGQSFSAEGL HVMEDDGATL YSFASDNDLF GYFPLLSYEN QAIDLENFDL SGELQFHSQY  240
GQLFPLEGLH IVQDNKANTY QIWHEEPVYS YKYCNDLFDY PSLWSDQYQI MTQENSMSSE  300
LSGEIIIESL WEQPCSMIEG LYTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05100.11e-52MYB family protein