PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021674879.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 237aa    MW: 27600.4 Da    PI: 9.5146
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021674879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.98.6e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+
  XP_021674879.1  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59
                    79***********************************************96 PP
2K-box996.9e-33771743100
           K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +++ +++ ++++ s++ e+akLk+++e  qr+qRh++GedL++LslkeLq++eqq++++lk+iRs+Kn+l++e+i elqkk k+lqe+n++  kk
  XP_021674879.1  77 DRQLVATGSETNGSWTLEHAKLKARMEVFQRNQRHFMGEDLDTLSLKELQSVEQQIDSALKHIRSRKNQLMYESIAELQKKSKALQEQNNQFAKK 171
                     5666677788899******************************************************************************9999 PP

           K-box  98 lee 100
                      +e
  XP_021674879.1 172 EKE 174
                     875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD  60
SCMERILERY ERYSYADRQL VATGSETNGS WTLEHAKLKA RMEVFQRNQR HFMGEDLDTL  120
SLKELQSVEQ QIDSALKHIR SRKNQLMYES IAELQKKSKA LQEQNNQFAK KEKEKEKEIA  180
QQNQKEQQNH IIDSSTVLPP PMQSLNIRGN RDEDETTPMQ NLANAVLPSW MIPYLNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.12e-92MIKC_MADS family protein