PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021674030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 352aa    MW: 39367.2 Da    PI: 6.3131
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021674030.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.24.5e-191663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++lv+ ++++G g+W++ ++  g++R++k+c++rw +yl
   XP_021674030.1 16 KGPWTPEEDKKLVEFIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 63
                     79********************************************97 PP

2Myb_DNA-binding57.23.9e-1869114148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++ eE+++++++++ lG++ W++Ia+ ++ gRt++++k++w++yl
   XP_021674030.1  69 RGKFSDEEEQIIINLHAVLGNK-WSAIAQNLP-GRTDNEIKNYWNTYL 114
                      89********************.*********.*************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MMEKSSPFED ENGLKKGPWT PEEDKKLVEF IQKHGHGSWR ALPKLAGLNR CGKSCRLRWT  60
NYLRPDIKRG KFSDEEEQII INLHAVLGNK WSAIAQNLPG RTDNEIKNYW NTYLKKKLLQ  120
MGIDPVTHRP RTDLNLLSNL PQLLAAANFI NLVNNIPGDN GLRRPHNSTD STDLAKLQLL  180
NNINLQILSS NPLPDKEAAA ANLLGSNTVY EYLTMNSQLE GLLSSCQAAG YNFLSPQDIT  240
RFLPNFPNLE ALQTQYHTLK DSKAASNNNG QLVSSSYAVP TNSLLPPLVS ASPDDHHCNQ  300
TETCSRINPN DISKLSSSST TFEAWGDLMD DEASDTYWGA SQPWPMSEYK LD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.24e-83MYB family protein