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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021674030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 352aa MW: 39367.2 Da PI: 6.3131 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.2 | 4.5e-19 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ ++++G g+W++ ++ g++R++k+c++rw +yl XP_021674030.1 16 KGPWTPEEDKKLVEFIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 57.2 | 3.9e-18 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+++++++++ lG++ W++Ia+ ++ gRt++++k++w++yl XP_021674030.1 69 RGKFSDEEEQIIINLHAVLGNK-WSAIAQNLP-GRTDNEIKNYWNTYL 114 89********************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 352 aa Download sequence |
MMEKSSPFED ENGLKKGPWT PEEDKKLVEF IQKHGHGSWR ALPKLAGLNR CGKSCRLRWT 60 NYLRPDIKRG KFSDEEEQII INLHAVLGNK WSAIAQNLPG RTDNEIKNYW NTYLKKKLLQ 120 MGIDPVTHRP RTDLNLLSNL PQLLAAANFI NLVNNIPGDN GLRRPHNSTD STDLAKLQLL 180 NNINLQILSS NPLPDKEAAA ANLLGSNTVY EYLTMNSQLE GLLSSCQAAG YNFLSPQDIT 240 RFLPNFPNLE ALQTQYHTLK DSKAASNNNG QLVSSSYAVP TNSLLPPLVS ASPDDHHCNQ 300 TETCSRINPN DISKLSSSST TFEAWGDLMD DEASDTYWGA SQPWPMSEYK LD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16770.2 | 4e-83 | MYB family protein |