PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021674017.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 285aa    MW: 32182.4 Da    PI: 6.7788
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021674017.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.71.7e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd++l+ ++ ++G  +W+  ++  g+ R++k+c++rw +yl
   XP_021674017.1 14 KGAWSPEEDDKLKAYIMKYGHWNWRELPKFAGLSRCGKSCRLRWMNYL 61
                     79******************99************************97 PP
2Myb_DNA-binding50.16.4e-1668112248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g+ ++eE  l+ +++kqlG++ W++Ia++++ gRt++++k++w+++l
   XP_021674017.1  68 GNYSKEEGALIMKLHKQLGNK-WSKIAAELP-GRTDNEIKNYWHTHL 112
                      5789*****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MVRAAFFDKN GLKKGAWSPE EDDKLKAYIM KYGHWNWREL PKFAGLSRCG KSCRLRWMNY  60
LRPGVKYGNY SKEEGALIMK LHKQLGNKWS KIAAELPGRT DNEIKNYWHT HLKKRTKESQ  120
SATRLKEKCS MEQSSEIAKC EVNSKNEDLK DESSVPNKPL HPILESSPLS PEPSSNELSY  180
LTSDSSLVTV SGTSSSSNWI AGDGLLCFET FESTSEDFWT QPFVADLDGY RLPLPEGGLG  240
SPYLASYDDV MDLFYQGMQD FRGISSAGDI LHICAPQPIG WLNMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.19e-55MYB family protein