PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673536.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 401aa MW: 44029.4 Da PI: 6.5696

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.8	2.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W + +++ g+ R++k+c++rw +yl XP_021673536.1 14 KGPWTPEEDQKLLACIEEHGHGSWQALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.4	1.2e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_021673536.1 67 RGKFSLQEEQTIIQLHALLGNK-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MVRSPRCEKG GLKKGPWTPE EDQKLLACIE EHGHGSWQAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNKWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG 120 IDPVTHKPKA DAFGSSSGQS KDAANLSHTA QWESARLEAE ARSVRESKLA SKPPENQFGF 180 SSSSSASSLH LPKLPSTNKA AEAAAPPVRP KCLDVLKAWQ GMASDMFFSG DSLESPTSTL 240 NFAENALAIP LVGFHHETSI LPLQFPTCNI TCKGGMDEDV SHSEHEWKCF EKSNQMALQV 300 KETLGESIAV HEMTTYGSEN AWIFDSFRVV PNDFASIGNI VEGLSDNIAY NSGDQNSSMA 360 GENTTTTSDS CGANLEDLQG NYWNSLLLNL VDVPPSGSPV F

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MVRSPRCEKG GLKKGPWTPE EDQKLLACIE EHGHGSWQAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNKWS AIATHLPKRT DNEIKNYWNT HLKKRLDKMG  120
IDPVTHKPKA DAFGSSSGQS KDAANLSHTA QWESARLEAE ARSVRESKLA SKPPENQFGF  180
SSSSSASSLH LPKLPSTNKA AEAAAPPVRP KCLDVLKAWQ GMASDMFFSG DSLESPTSTL  240
NFAENALAIP LVGFHHETSI LPLQFPTCNI TCKGGMDEDV SHSEHEWKCF EKSNQMALQV  300
KETLGESIAV HEMTTYGSEN AWIFDSFRVV PNDFASIGNI VEGLSDNIAY NSGDQNSSMA  360
GENTTTTSDS CGANLEDLQG NYWNSLLLNL VDVPPSGSPV F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-107	MYB family protein