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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021673519.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 206aa MW: 23626.5 Da PI: 8.0582 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 77.8 | 7.7e-25 | 9 | 56 | 1 | 48 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48 krien rqvtf+kRr g+lKKA+ELSvLCdae+ v ifss+gk+y+ XP_021673519.1 9 KRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGVFIFSSHGKFYD 56 79********************************************97 PP | |||||||
2 | K-box | 47.5 | 7.5e-17 | 86 | 182 | 10 | 100 |
K-box 10 eeakaeslqqelakLkkeienLq....reqRhllGedL..esLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 e+++ ++e++ Lkkeie Lq +R l+G + ++++ eL Le++Le + +iRs+K+e++ ++i+ l++ke l+ +n++L+ k+ XP_021673519.1 86 ESTQPLDAKEEINMLKKEIEILQkglrYVNRYLVGGGAahAQMTMDELLILEKNLEIWICHIRSTKMEIMSKEIQLLRNKEGVLKAANQYLQDKI 180 5566667899*************6665455778876542279****************************************************9 PP K-box 99 ee 100 ee XP_021673519.1 181 EE 182 97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MARGKVQMKR IENPVHRQVT FCKRRSGLLK KAKELSVLCD AEIGVFIFSS HGKFYDLATN 60 GSMQGLIEKY MKVTGGSLEP DEQAKESTQP LDAKEEINML KKEIEILQKG LRYVNRYLVG 120 GGAAHAQMTM DELLILEKNL EIWICHIRST KMEIMSKEIQ LLRNKEGVLK AANQYLQDKI 180 EETVEITNFE PMTPYPLTIQ NDIFQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 5e-76 | MIKC_MADS family protein |