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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021672877.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27576.5 Da PI: 8.456 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.8 | 1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_021672877.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 98.7 | 8.7e-33 | 83 | 173 | 10 | 100 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++++s +qe+ kL++++e Lqr+qRhllGedL++L+ keL+qLe+qLe+sl++iRskK++++l+q+ +lq++e+ l e+nkaL++klee XP_021672877.1 83 PGHETQSNYQEYLKLQARVEVLQRSQRHLLGEDLGPLNTKELEQLEHQLETSLNQIRSKKTQFMLDQLVDLQNREHLLLETNKALKRKLEE 173 557899**********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST 60 SSMMRTLERY QKCSYGALEA SQPGHETQSN YQEYLKLQAR VEVLQRSQRH LLGEDLGPLN 120 TKELEQLEHQ LETSLNQIRS KKTQFMLDQL VDLQNREHLL LETNKALKRK LEEGSGQVPL 180 LLAWEDGGQT IPYSRLPAHS EGFFHPLGGN STLQIGYNPV GADEINVAHT QHVNGFIPGW 240 ML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 1e-108 | MIKC_MADS family protein |