PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021672877.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 242aa    MW: 27576.5 Da    PI: 8.456
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021672877.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.81e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  XP_021672877.1  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
                    79***********************************************96 PP

2K-box98.78.7e-338317310100
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                       ++++s +qe+ kL++++e Lqr+qRhllGedL++L+ keL+qLe+qLe+sl++iRskK++++l+q+ +lq++e+ l e+nkaL++klee
  XP_021672877.1  83 PGHETQSNYQEYLKLQARVEVLQRSQRHLLGEDLGPLNTKELEQLEHQLETSLNQIRSKKTQFMLDQLVDLQNREHLLLETNKALKRKLEE 173
                     557899**********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST  60
SSMMRTLERY QKCSYGALEA SQPGHETQSN YQEYLKLQAR VEVLQRSQRH LLGEDLGPLN  120
TKELEQLEHQ LETSLNQIRS KKTQFMLDQL VDLQNREHLL LETNKALKRK LEEGSGQVPL  180
LLAWEDGGQT IPYSRLPAHS EGFFHPLGGN STLQIGYNPV GADEINVAHT QHVNGFIPGW  240
ML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.11e-108MIKC_MADS family protein