PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021672496.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 215aa    MW: 24211.2 Da    PI: 7.4675
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021672496.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.86.8e-101350148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+++Ed++l+d+++ +G g          ++R++k+c++rw +yl
   XP_021672496.1 13 KGAWSKQEDQKLIDYITIHGEG----------LHRCGKSCRLRWINYL 50
                     79******************99..........79************97 PP

2Myb_DNA-binding52.31.3e-1656101148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
   XP_021672496.1  56 RGNFAQDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 101
                      8999******************.*********.************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MRKPCCDKQG NNKGAWSKQE DQKLIDYITI HGEGLHRCGK SCRLRWINYL RPDIKRGNFA  60
QDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LRKKLINMGI DPNNHRLNQI  120
LPRPQPERVS SPIDEDTCKT KKSTGDYIDR VSDAASSSLE ENETSAGSSD INLDLTIAVP  180
SSAHTSTSET RPENCDTAAT SEVRSETLPT LLLFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.11e-63MYB family protein