PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669439.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 349aa MW: 39407 Da PI: 6.2702

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669439.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.5e-16	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++ G g+W+ Iar g++R++k+c++rw +yl XP_021669439.1 22 KGLWSPEEDEKLIKYMLTNGQGCWSDIARNAGLHRCGKSCRLRWINYL 69 678*******************************************97 PP
2	Myb_DNA-binding	52.4	1.2e-16	75	119	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E+el+++++ lG++ W+ Ia++++ gRt++++k++w++ XP_021669439.1 75 RGAFSPQEEELIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNST 119 89******************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MRKPDLMGKE RGVNNNKAKL RKGLWSPEED EKLIKYMLTN GQGCWSDIAR NAGLHRCGKS 60 CRLRWINYLR PDLKRGAFSP QEEELIIHLH SILGNRWSQI AARLPGRTDN EIKNFWNSTL 120 KKRLKLISNN NPSTSSPNND SDSSVPRDPV IGNIMPMHND DQDLIAMCMD SSSSSSASIQ 180 AIVAGGGNQF DPFLILNNYQ FDGTGAAALF DMSTCLTQVG MGDGFYGDCG ILENHHNKIG 240 IERDLCVPPL ESSRSIEEEE KKNNNNAVTN HSIISVKSNI NNNINNHLNN NNSCFNNTDH 300 HHHHQNLKVE DMFGFENHWQ GENLRMGEWD LEGLMENISS FPFLDFQVE

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MRKPDLMGKE RGVNNNKAKL RKGLWSPEED EKLIKYMLTN GQGCWSDIAR NAGLHRCGKS  60
CRLRWINYLR PDLKRGAFSP QEEELIIHLH SILGNRWSQI AARLPGRTDN EIKNFWNSTL  120
KKRLKLISNN NPSTSSPNND SDSSVPRDPV IGNIMPMHND DQDLIAMCMD SSSSSSASIQ  180
AIVAGGGNQF DPFLILNNYQ FDGTGAAALF DMSTCLTQVG MGDGFYGDCG ILENHHNKIG  240
IERDLCVPPL ESSRSIEEEE KKNNNNAVTN HSIISVKSNI NNNINNHLNN NNSCFNNTDH  300
HHHHQNLKVE DMFGFENHWQ GENLRMGEWD LEGLMENISS FPFLDFQVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08500.1	1e-86	MYB family protein