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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021668755.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 202aa MW: 23316.8 Da PI: 10.241 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.6 | 1.5e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + r+vtfskRrngilKKA+ELS+LCdaev++++fs tgk y ++s XP_021668755.1 9 KRIENPTSRHVTFSKRRNGILKKAFELSILCDAEVCLLVFSATGKAYQFAS 59 79**********************************************986 PP | |||||||
2 | K-box | 71.7 | 2.2e-24 | 84 | 172 | 12 | 100 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++e +++e++ L++ i + ++ ++hl Ged+++L +keL+qLe+qL++++++iRskK ++++e+i+ l++k ++lqe n++L+k+l+e XP_021668755.1 84 RTMEFWRNEIEELERTIATTETGLKHLCGEDISTLGMKELKQLERQLKTGVERIRSKKRRIITEHINLLKRKHRALQEGNTRLQKRLQE 172 56899********************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MGRGKVDLKR IENPTSRHVT FSKRRNGILK KAFELSILCD AEVCLLVFSA TGKAYQFASH 60 DTDRTIARYR REVGLLGSND QYCRTMEFWR NEIEELERTI ATTETGLKHL CGEDISTLGM 120 KELKQLERQL KTGVERIRSK KRRIITEHIN LLKRKHRALQ EGNTRLQKRL QELRDASIGT 180 GILDPNPCNA FQQRVVDDGI LH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 4e-45 | MIKC_MADS family protein |