PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667524.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 362aa MW: 40275.9 Da PI: 8.4946

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.3	1.1e-15	74	119	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W Ed +l+++v+ +G+ +W++Ia++++ gR++k+c++rw++ XP_021667524.1 74 RGHWKLAEDTKLKELVAVYGPQNWNLIAEKLQ-GRSGKSCRLRWFNQ 119 899***************************.*********996 PP
2	Myb_DNA-binding	54.6	2.5e-17	126	169	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l a++ +G++ W++Ia+ ++ gRt++ +k++w+ XP_021667524.1 126 RSAFSEEEEERLMAAHRVYGNK-WALIAQLFP-GRTDNAVKNHWHV 169 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
METFTNMGSQ NICHCKSFNN KTTHHQMSFS SLMPKCCACS LESNQNSSVD DKCKGDKNGE 60 GSVISGQSSK VCARGHWKLA EDTKLKELVA VYGPQNWNLI AEKLQGRSGK SCRLRWFNQL 120 DPRINRSAFS EEEEERLMAA HRVYGNKWAL IAQLFPGRTD NAVKNHWHVI MARKYREQSF 180 AYRRRKQTEA AKRRAEDGSG SASRINEVVP NLCNGRIIKP FHHVPLADVN SKGFYDLTSS 240 EDAGTSGRLL FVRSSNLLSL PQGSCAEQTP FDFFSGHKSY EIANQQEHCS GTTFFVLHNM 300 QQSRNHHFSA GFSDSMASAT SQVSVSEPSS SSSLSFAENN AASHFETTMS PTFIDFLGVG 360 AS

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

METFTNMGSQ NICHCKSFNN KTTHHQMSFS SLMPKCCACS LESNQNSSVD DKCKGDKNGE  60
GSVISGQSSK VCARGHWKLA EDTKLKELVA VYGPQNWNLI AEKLQGRSGK SCRLRWFNQL  120
DPRINRSAFS EEEEERLMAA HRVYGNKWAL IAQLFPGRTD NAVKNHWHVI MARKYREQSF  180
AYRRRKQTEA AKRRAEDGSG SASRINEVVP NLCNGRIIKP FHHVPLADVN SKGFYDLTSS  240
EDAGTSGRLL FVRSSNLLSL PQGSCAEQTP FDFFSGHKSY EIANQQEHCS GTTFFVLHNM  300
QQSRNHHFSA GFSDSMASAT SQVSVSEPSS SSSLSFAENN AASHFETTMS PTFIDFLGVG  360
AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	2e-74	MYB family protein