PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021666703.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 356aa MW: 40516.5 Da PI: 6.513

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021666703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.4	7.6e-14	5	52	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed++lv ++ ++G +W+ ++ g+ Rt+k+c++rw +yl XP_021666703.1 5 KGKWSPKEDQKLVSYISRYGIWNWNEMPKAAGLPRTGKSCRLRWMNYL 52 79****************99******99**********97 PP
2	Myb_DNA-binding	54.8	2.2e-17	59	102	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g++++eE+e +v++++++G++ W++Ia++++ gRt++++k++w++ XP_021666703.1 59 GNFSKEEEETIVKLHEMMGNR-WSAIAAKLP-GRTDNDIKNYWNSN 102 89*****************.*****.*********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MALKKGKWSP KEDQKLVSYI SRYGIWNWNE MPKAAGLPRT GKSCRLRWMN YLRPFIKHGN 60 FSKEEEETIV KLHEMMGNRW SAIAAKLPGR TDNDIKNYWN SNLRKRSRST ASATKLDRLQ 120 TCGVQPKTKK HLSKGTVPKA MDAESSKEIP ISSSSNLVSE IDKNRGLHRM EDKGETLYPF 180 ASGSDLFGCF SPLSYDDKAL DPENIDVSGE LQFYSLCGQQ FPLEGFHIVE DNKANKYPIW 240 HEEPVHSYNC HDDLFKYPAF WSDEYQVTEE NNSGLSELSG GVIQNLCEHP RPLMEDLYTA 300 NDKREVEGRA HPFEDCPPWY DGNQISGEVQ FLWDYQVTIS VVGVVASASG SPFIKA

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MALKKGKWSP KEDQKLVSYI SRYGIWNWNE MPKAAGLPRT GKSCRLRWMN YLRPFIKHGN  60
FSKEEEETIV KLHEMMGNRW SAIAAKLPGR TDNDIKNYWN SNLRKRSRST ASATKLDRLQ  120
TCGVQPKTKK HLSKGTVPKA MDAESSKEIP ISSSSNLVSE IDKNRGLHRM EDKGETLYPF  180
ASGSDLFGCF SPLSYDDKAL DPENIDVSGE LQFYSLCGQQ FPLEGFHIVE DNKANKYPIW  240
HEEPVHSYNC HDDLFKYPAF WSDEYQVTEE NNSGLSELSG GVIQNLCEHP RPLMEDLYTA  300
NDKREVEGRA HPFEDCPPWY DGNQISGEVQ FLWDYQVTIS VVGVVASASG SPFIKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	1e-48	MYB family protein