PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021666702.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 311aa    MW: 35994.9 Da    PI: 4.8395
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021666702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.51.7e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l+ +++++G  +W+  ++  g+ R++k+c++rw +yl
   XP_021666702.1 14 KGTWSPEEDQKLITYINRYGIWNWNEMPKAAGLLRSGKSCRLRWINYL 61
                     799*****************99**********99************97 PP
2Myb_DNA-binding57.62.9e-1867109145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      rg++++eEd+ +++++++lG++ W++Ia++m+ gRt++++k++w+
   XP_021666702.1  67 RGNFSKEEDDTILCLHELLGNR-WAAIAAKMP-GRTDNEIKNHWH 109
                      89********************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MDLQRQKGEL PLKKGTWSPE EDQKLITYIN RYGIWNWNEM PKAAGLLRSG KSCRLRWINY  60
LKPGIKRGNF SKEEDDTILC LHELLGNRWA AIAAKMPGRT DNEIKNHWHG NLKKRLNNYY  120
GVQETKLQRK QISEVEPKRK IDSDHDISAS TSPNASTSDY SKVTPILSES SPSGFSSRSN  180
LENEFDENHN IEQNFVSYEL QRDVQWSQEK SFSMEDLHLL QDSGATYVDQ MWLEESFSHQ  240
YASQGGVCSS NSCEYSPLWP DNDLFMVDGL SGEFQSFPME VLCTMEENWP TTYISHFEAD  300
SDLFQYPSLW N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-54MYB family protein