PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021665908.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 1044aa MW: 115405 Da PI: 4.9142

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021665908.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2.1e-18	38	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_021665908.1 38 KGQWTAEEDEILRKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 84 799**************************9.**********986 PP
2	Myb_DNA-binding	65.8	7.7e-21	90	136	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde+++++v+++G++ W+tIa++++ gR +kqc++rw+++l XP_021665908.1 90 KGPWSKEEDEIIIELVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 136 79****************************.***********97 PP
3	Myb_DNA-binding	45.3	2e-14	142	184	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT++E++ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_021665908.1 142 KEAWTQQEELSLIRAHQIYGNR-WAELTKFLP-GRTDNAIKNHWN 184 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1044 aa Download sequence
MESDKSISAP SSDGHSEGVQ RIRPLHGRTS GPARRSTKGQ WTAEEDEILR KAVQRFKGKN 60 WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IIELVNKYGP KKWSTIAQHL 120 PGRIGKQCRE RWHNHLNPSI NKEAWTQQEE LSLIRAHQIY GNRWAELTKF LPGRTDNAIK 180 NHWNSSVKKK LDSYLASGLL EQFQGLPLVP HQNQPMPSSS SRVQSSGDDP GPKCGIETEE 240 ISECSQESII AGCSQTASGF GNAVLHTTEE FQLAEESGLG KERSSSPASC SEQYFTSVGD 300 VTFSIPEIPC EVGCSSNFLQ QNFSQNTITS ASSEYQFNSQ ELPNISSLEL GQESSGLSTH 360 CIAANESHEL VNVPFQTSMG NMTAGSAKPD HIFISDDECC RFLFADAMNG GVFSSGNFTK 420 GSNSVACIDS LNCQSSNYQI SETDRSAQPF SPSKSVVLAA TCSRPFPSGP SLLSADDSNL 480 ICRREQNQII NHSFAANEQE YVISAHDGFI YTDGTDRSPC GDGTDNTDMQ EQHYLREPSK 540 LAPPDTFTSG SDTIQSCPVD EMPNVHTEQQ DAGALCYEPP RFPSLDIPFL SCDLIQSGSD 600 MQQEYSPLGI RQLMMSSMNC ITPFRLWESP SRDDSPDAVL KSAARTFTGT PSILKKRNRD 660 LLSPLSDRRV DKKLEIDLTS SLTKEFSRLE VLFDESETHR ASLQSPSNQK RNHESIYEDK 720 ENLDPALEGR QEKGRDCSAF VDNKISEKDC DSSDSQDNKK ERTVDGVANT KVHNDANAQH 780 AEQLSGALGE DSMNDLLFSP DQVGFKGDKA FAPSSRTPKN LYRRILGTLS EQCIASESSS 840 GNSCIVVRSP TIYKKNHENH LLASTSAPLE NTIDNTGNDA GTENLSIFGE TPFKRSIESP 900 SAWKSPWFIN SFLPGPRVDT DISIEDIGIF LSPGERSYDA IALMKQLSEH TASAYADALE 960 VLGNETPETI LEKRRSNMDQ ENNCAPNIQP ENVSHLASNV STSTECRTLD FSECETPGKR 1020 TERERSSTAM TFSSPSSYLL KGCR

Sequence ? help Back to Top

Protein Sequence Length: 1044 aa Download sequence

MESDKSISAP SSDGHSEGVQ RIRPLHGRTS GPARRSTKGQ WTAEEDEILR KAVQRFKGKN  60
WKKIAECFKD RTDVQCLHRW QKVLNPELVK GPWSKEEDEI IIELVNKYGP KKWSTIAQHL  120
PGRIGKQCRE RWHNHLNPSI NKEAWTQQEE LSLIRAHQIY GNRWAELTKF LPGRTDNAIK  180
NHWNSSVKKK LDSYLASGLL EQFQGLPLVP HQNQPMPSSS SRVQSSGDDP GPKCGIETEE  240
ISECSQESII AGCSQTASGF GNAVLHTTEE FQLAEESGLG KERSSSPASC SEQYFTSVGD  300
VTFSIPEIPC EVGCSSNFLQ QNFSQNTITS ASSEYQFNSQ ELPNISSLEL GQESSGLSTH  360
CIAANESHEL VNVPFQTSMG NMTAGSAKPD HIFISDDECC RFLFADAMNG GVFSSGNFTK  420
GSNSVACIDS LNCQSSNYQI SETDRSAQPF SPSKSVVLAA TCSRPFPSGP SLLSADDSNL  480
ICRREQNQII NHSFAANEQE YVISAHDGFI YTDGTDRSPC GDGTDNTDMQ EQHYLREPSK  540
LAPPDTFTSG SDTIQSCPVD EMPNVHTEQQ DAGALCYEPP RFPSLDIPFL SCDLIQSGSD  600
MQQEYSPLGI RQLMMSSMNC ITPFRLWESP SRDDSPDAVL KSAARTFTGT PSILKKRNRD  660
LLSPLSDRRV DKKLEIDLTS SLTKEFSRLE VLFDESETHR ASLQSPSNQK RNHESIYEDK  720
ENLDPALEGR QEKGRDCSAF VDNKISEKDC DSSDSQDNKK ERTVDGVANT KVHNDANAQH  780
AEQLSGALGE DSMNDLLFSP DQVGFKGDKA FAPSSRTPKN LYRRILGTLS EQCIASESSS  840
GNSCIVVRSP TIYKKNHENH LLASTSAPLE NTIDNTGNDA GTENLSIFGE TPFKRSIESP  900
SAWKSPWFIN SFLPGPRVDT DISIEDIGIF LSPGERSYDA IALMKQLSEH TASAYADALE  960
VLGNETPETI LEKRRSNMDQ ENNCAPNIQP ENVSHLASNV STSTECRTLD FSECETPGKR  1020
TERERSSTAM TFSSPSSYLL KGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein