PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664921.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 479aa MW: 54267.8 Da PI: 8.3201

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44	5.2e-14	24	68	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++Ed++l + + ++G+++W+ Ia+++ +t qc+ rw++yl XP_021664921.1 24 TWTQQEDDILRQQISLHGTENWAIIASKFK-DKTTRQCRRRWYTYL 68 6**************************9.***********97 PP
2	Myb_DNA-binding	43.6	6.7e-14	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_021664921.1 74 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 117 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MQEMKKKNDG GNADSKKKER HIVTWTQQED DILRQQISLH GTENWAIIAS KFKDKTTRQC 60 RRRWYTYLNS DFKKGGWSPE EDMLLCEAQK IFGNRWTEIA KVVSGRTDNA VKNRFSTLCK 120 KRAKYEALAK ENKNTYINSN NKRILFHIGF NEDGTPANTA PAKKMRRSHI PDHSEHCKLA 180 DRSHLKCGNQ QPRPPFAVLA QNFHNVKVDD QHHAINAKEV SIHASQNSKI QGTFLRKDDP 240 KITALMQQAQ LLSSLALKVD TENTDKSLET AWKVLQDFLS QKENDTLRYR FADTDFQPKD 300 FKDLIEDLRS SNDGSRPSWR QSDLYEESPA SSEYSTGSTL IPYTAADKTE QTQAEIGALQ 360 EDIPNELHSV HIKKQSNVDE CEKEIISCAN ITRGEIFPSF DEQANKDLAV SASLSAEFSS 420 PVQVTPLFRS LAAGIPSPKF SESERNFLLK TLGVESPCPN PSTNPSQPPP CRRALLQSL

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MQEMKKKNDG GNADSKKKER HIVTWTQQED DILRQQISLH GTENWAIIAS KFKDKTTRQC  60
RRRWYTYLNS DFKKGGWSPE EDMLLCEAQK IFGNRWTEIA KVVSGRTDNA VKNRFSTLCK  120
KRAKYEALAK ENKNTYINSN NKRILFHIGF NEDGTPANTA PAKKMRRSHI PDHSEHCKLA  180
DRSHLKCGNQ QPRPPFAVLA QNFHNVKVDD QHHAINAKEV SIHASQNSKI QGTFLRKDDP  240
KITALMQQAQ LLSSLALKVD TENTDKSLET AWKVLQDFLS QKENDTLRYR FADTDFQPKD  300
FKDLIEDLRS SNDGSRPSWR QSDLYEESPA SSEYSTGSTL IPYTAADKTE QTQAEIGALQ  360
EDIPNELHSV HIKKQSNVDE CEKEIISCAN ITRGEIFPSF DEQANKDLAV SASLSAEFSS  420
PVQVTPLFRS LAAGIPSPKF SESERNFLLK TLGVESPCPN PSTNPSQPPP CRRALLQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	1e-157	MYB family protein